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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKNU] human gut metagenome; human gut
HIT:
120 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182857130
OKNU01000035
[OKNU] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182857161
OKNU01000264
[OKNU] human gut metagenome; human gut
61
149
+
Ser
TGA
[ENA]
¢þ
>WENV182857132
OKNU01000043
[OKNU] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182857174
OKNU01000808
[OKNU] human gut metagenome; human gut
67
141
+
Ala
TGC
[ENA]
¢þ
>WENV182857157
OKNU01000196
[OKNU] human gut metagenome; human gut
69
154
+
Tyr
GTA
[ENA]
¢þ
>WENV182857166
OKNU01000344
[OKNU] human gut metagenome; human gut
72
147
+
Val
TAC
[ENA]
¢þ
>WENV182857142
OKNU01000056
[OKNU] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¢þ
>WENV182857170
OKNU01000485
[OKNU] human gut metagenome; human gut
98
7
-
Ser
GGA
[ENA]
¢þ
>WENV182857123
OKNU01000030
[OKNU] human gut metagenome; human gut
107
182
+
Trp
CCA
[ENA]
¢þ
>WENV182857180
OKNU01000944
[OKNU] human gut metagenome; human gut
134
59
-
Asn
GTT
[ENA]
¢þ
>WENV182857133
OKNU01000043
[OKNU] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182857141
OKNU01000053
[OKNU] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182857143
OKNU01000056
[OKNU] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¢þ
>WENV182857158
OKNU01000196
[OKNU] human gut metagenome; human gut
163
238
+
fMet
CAT
[ENA]
¢þ
>WENV182857175
OKNU01000808
[OKNU] human gut metagenome; human gut
163
238
+
Met
CAT
[ENA]
¢þ
>WENV182857102
OKNU01000005
[OKNU] human gut metagenome; human gut
178
94
-
Tyr
GTA
[ENA]
¢þ
>WENV182857134
OKNU01000043
[OKNU] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182857162
OKNU01000279
[OKNU] human gut metagenome; human gut
255
329
+
Gly
TCC
[ENA]
¢þ
>WENV182857176
OKNU01000808
[OKNU] human gut metagenome; human gut
257
332
+
Ile2
CAT
[ENA]
¢þ
>WENV182857171
OKNU01000508
[OKNU] human gut metagenome; human gut
265
340
+
Arg
CCT
[ENA]
¢þ
>WENV182857159
OKNU01000196
[OKNU] human gut metagenome; human gut
278
353
+
Thr
GGT
[ENA]
¢þ
>WENV182857186
OKNU01001283
[OKNU] human gut metagenome; human gut
288
213
-
Ala
TGC
[ENA]
¢þ
>WENV182857167
OKNU01000344
[OKNU] human gut metagenome; human gut
293
383
+
Ser
GCT
[ENA]
¢þ
>WENV182857135
OKNU01000043
[OKNU] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¢þ
>WENV182857181
OKNU01001031
[OKNU] human gut metagenome; human gut
338
413
+
His
GTG
[ENA]
¢þ
>WENV182857160
OKNU01000196
[OKNU] human gut metagenome; human gut
358
434
+
Met
CAT
[ENA]
¢þ
>WENV182857177
OKNU01000808
[OKNU] human gut metagenome; human gut
365
454
+
Ser
TGA
[ENA]
¢þ
>WENV182857136
OKNU01000043
[OKNU] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¢þ
>WENV182857187
OKNU01001430
[OKNU] human gut metagenome; human gut
407
480
+
Lys
TTT
[ENA]
¢þ
>WENV182857182
OKNU01001031
[OKNU] human gut metagenome; human gut
415
489
+
Gln
TTG
[ENA]
¢þ
>WENV182857184
OKNU01001230
[OKNU] human gut metagenome; human gut
465
548
+
Leu
TAG
[ENA]
¢þ
>WENV182857185
OKNU01001283
[OKNU] human gut metagenome; human gut
471
395
-
Ile
GAT
[ENA]
¢þ
>WENV182857178
OKNU01000808
[OKNU] human gut metagenome; human gut
487
562
+
fMet
CAT
[ENA]
¢þ
>WENV182857137
OKNU01000043
[OKNU] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¢þ
>WENV182857183
OKNU01001031
[OKNU] human gut metagenome; human gut
494
569
+
Lys
TTT
[ENA]
¢þ
>WENV182857173
OKNU01000635
[OKNU] human gut metagenome; human gut
532
605
+
Lys
CTT
[ENA]
¢þ
>WENV182857138
OKNU01000043
[OKNU] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¢þ
>WENV182857179
OKNU01000808
[OKNU] human gut metagenome; human gut
600
676
+
Asp
GTC
[ENA]
¢þ
>WENV182857169
OKNU01000460
[OKNU] human gut metagenome; human gut
640
715
+
Glu
CTC
[ENA]
¢þ
>WENV182857172
OKNU01000594
[OKNU] human gut metagenome; human gut
741
669
-
Gln
TTG
[ENA]
¢þ
>WENV182857139
OKNU01000043
[OKNU] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¢þ
>WENV182857165
OKNU01000321
[OKNU] human gut metagenome; human gut
799
724
-
Thr
CGT
[ENA]
¢þ
>WENV182857163
OKNU01000279
[OKNU] human gut metagenome; human gut
825
901
+
Pro
TGG
[ENA]
¢þ
>WENV182857164
OKNU01000279
[OKNU] human gut metagenome; human gut
905
981
+
Arg
TCT
[ENA]
¢þ
>WENV182857168
OKNU01000419
[OKNU] human gut metagenome; human gut
1005
1079
+
Ile2
CAT
[ENA]
¢þ
>WENV182857156
OKNU01000161
[OKNU] human gut metagenome; human gut
1172
1098
-
Arg
CCG
[ENA]
¢þ
>WENV182857148
OKNU01000105
[OKNU] human gut metagenome; human gut
1189
1264
+
Asp
GTC
[ENA]
¢þ
>WENV182857149
OKNU01000105
[OKNU] human gut metagenome; human gut
1281
1356
+
Phe
GAA
[ENA]
¢þ
>WENV182857150
OKNU01000105
[OKNU] human gut metagenome; human gut
1361
1435
+
Gly
GCC
[ENA]
¢þ
>WENV182857151
OKNU01000105
[OKNU] human gut metagenome; human gut
1440
1513
+
Cys
GCA
[ENA]
¢þ
>WENV182857152
OKNU01000105
[OKNU] human gut metagenome; human gut
1519
1607
+
Leu
TAA
[ENA]
¢þ
>WENV182857154
OKNU01000109
[OKNU] human gut metagenome; human gut
2129
2054
-
Ala
TGC
[ENA]
¢þ
>WENV182857153
OKNU01000109
[OKNU] human gut metagenome; human gut
2317
2241
-
Ile
GAT
[ENA]
¢þ
>WENV182857140
OKNU01000051
[OKNU] human gut metagenome; human gut
2386
2312
-
Gly
TCC
[ENA]
¢þ
>WENV182857155
OKNU01000119
[OKNU] human gut metagenome; human gut
2430
2354
-
Arg
ACG
[ENA]
¢þ
>WENV182857071
OKNU01000002
[OKNU] human gut metagenome; human gut
2757
2832
+
Ala
GGC
[ENA]
¢þ
>WENV182857072
OKNU01000002
[OKNU] human gut metagenome; human gut
2874
2949
+
Ala
GGC
[ENA]
¢þ
>WENV182857145
OKNU01000087
[OKNU] human gut metagenome; human gut
3619
3694
+
Thr
TGT
[ENA]
¢þ
>WENV182857146
OKNU01000087
[OKNU] human gut metagenome; human gut
3705
3789
+
Tyr
GTA
[ENA]
¢þ
>WENV182857147
OKNU01000087
[OKNU] human gut metagenome; human gut
3905
3979
+
Gly
TCC
[ENA]
¢þ
>WENV182857116
OKNU01000012
[OKNU] human gut metagenome; human gut
4729
4645
-
Leu
CAA
[ENA]
¢þ
>WENV182857128
OKNU01000032
[OKNU] human gut metagenome; human gut
9414
9490
+
Asp
GTC
[ENA]
¢þ
>WENV182857144
OKNU01000059
[OKNU] human gut metagenome; human gut
13400
13311
-
Ser
CGA
[ENA]
¢þ
>WENV182857118
OKNU01000014
[OKNU] human gut metagenome; human gut
19189
19118
-
Trp
CCA
[ENA]
¢þ
>WENV182857082
OKNU01000002
[OKNU] human gut metagenome; human gut
24914
24840
-
Arg
CCT
[ENA]
¢þ
>WENV182857121
OKNU01000023
[OKNU] human gut metagenome; human gut
31749
31822
+
Arg
CCG
[ENA]
¢þ
>WENV182857124
OKNU01000030
[OKNU] human gut metagenome; human gut
35383
35459
+
Arg
CCG
[ENA]
¢þ
>WENV182857125
OKNU01000030
[OKNU] human gut metagenome; human gut
35515
35590
+
His
GTG
[ENA]
¢þ
>WENV182857126
OKNU01000030
[OKNU] human gut metagenome; human gut
35614
35700
+
Leu
CAG
[ENA]
¢þ
>WENV182857127
OKNU01000030
[OKNU] human gut metagenome; human gut
35743
35819
+
Pro
TGG
[ENA]
¢þ
>WENV182857110
OKNU01000010
[OKNU] human gut metagenome; human gut
37092
36998
-
SeC
TCA
[ENA]
¢þ
>WENV182857131
OKNU01000035
[OKNU] human gut metagenome; human gut
47119
47190
+
Trp
CCA
[ENA]
¢þ
>WENV182857091
OKNU01000004
[OKNU] human gut metagenome; human gut
61456
61532
+
Met
CAT
[ENA]
¢þ
>WENV182857092
OKNU01000004
[OKNU] human gut metagenome; human gut
61542
61626
+
Leu
TAG
[ENA]
¢þ
>WENV182857093
OKNU01000004
[OKNU] human gut metagenome; human gut
61650
61724
+
Gln
TTG
[ENA]
¢þ
>WENV182857094
OKNU01000004
[OKNU] human gut metagenome; human gut
61761
61835
+
Gln
TTG
[ENA]
¢þ
>WENV182857095
OKNU01000004
[OKNU] human gut metagenome; human gut
61859
61935
+
Met
CAT
[ENA]
¢þ
>WENV182857096
OKNU01000004
[OKNU] human gut metagenome; human gut
61983
62057
+
Gln
CTG
[ENA]
¢þ
>WENV182857097
OKNU01000004
[OKNU] human gut metagenome; human gut
62134
62208
+
Gln
CTG
[ENA]
¢þ
>WENV182857129
OKNU01000032
[OKNU] human gut metagenome; human gut
63458
63383
-
Thr
CGT
[ENA]
¢þ
>WENV182857117
OKNU01000014
[OKNU] human gut metagenome; human gut
73922
73994
+
Thr
GGT
[ENA]
¢þ
>WENV182857083
OKNU01000003
[OKNU] human gut metagenome; human gut
88985
89071
+
Leu
GAG
[ENA]
¢þ
>WENV182857084
OKNU01000003
[OKNU] human gut metagenome; human gut
93018
93094
+
fMet
CAT
[ENA]
¢þ
>WENV182857122
OKNU01000026
[OKNU] human gut metagenome; human gut
100965
101039
+
Lys
CTT
[ENA]
¢þ
>WENV182857104
OKNU01000007
[OKNU] human gut metagenome; human gut
103598
103512
-
Leu
CAG
[ENA]
¢þ
>WENV182857103
OKNU01000007
[OKNU] human gut metagenome; human gut
103715
103629
-
Leu
CAG
[ENA]
¢þ
>WENV182857120
OKNU01000020
[OKNU] human gut metagenome; human gut
122738
122662
-
Arg
ACG
[ENA]
¢þ
>WENV182857112
OKNU01000011
[OKNU] human gut metagenome; human gut
131497
131422
-
Arg
TCT
[ENA]
¢þ
>WENV182857115
OKNU01000012
[OKNU] human gut metagenome; human gut
131794
131719
-
Gly
GCC
[ENA]
¢þ
>WENV182857114
OKNU01000012
[OKNU] human gut metagenome; human gut
131942
131867
-
Gly
GCC
[ENA]
¢þ
>WENV182857113
OKNU01000012
[OKNU] human gut metagenome; human gut
132090
132015
-
Gly
GCC
[ENA]
¢þ
>WENV182857106
OKNU01000009
[OKNU] human gut metagenome; human gut
136200
136286
+
Leu
GAG
[ENA]
¢þ
>WENV182857081
OKNU01000002
[OKNU] human gut metagenome; human gut
146925
146849
-
Pro
GGG
[ENA]
¢þ
>WENV182857107
OKNU01000009
[OKNU] human gut metagenome; human gut
147533
147615
+
Tyr
GTA
[ENA]
¢þ
>WENV182857108
OKNU01000009
[OKNU] human gut metagenome; human gut
147623
147696
+
Gln
TTG
[ENA]
¢þ
>WENV182857119
OKNU01000016
[OKNU] human gut metagenome; human gut
148658
148583
-
Lys
TTT
[ENA]
¢þ
>WENV182857109
OKNU01000010
[OKNU] human gut metagenome; human gut
163648
163724
+
Pro
CGG
[ENA]
¢þ
>WENV182857111
OKNU01000011
[OKNU] human gut metagenome; human gut
180833
180908
+
Arg
CCT
[ENA]
¢þ
>WENV182857090
OKNU01000003
[OKNU] human gut metagenome; human gut
199701
199626
-
Ile2
CAT
[ENA]
¢þ
>WENV182857101
OKNU01000005
[OKNU] human gut metagenome; human gut
218678
218602
-
Val
GAC
[ENA]
¢þ
>WENV182857100
OKNU01000005
[OKNU] human gut metagenome; human gut
218759
218683
-
Val
GAC
[ENA]
¢þ
>WENV182857099
OKNU01000005
[OKNU] human gut metagenome; human gut
218840
218764
-
Val
GAC
[ENA]
¢þ
>WENV182857105
OKNU01000008
[OKNU] human gut metagenome; human gut
227959
228031
+
Thr
CGT
[ENA]
¢þ
>WENV182857089
OKNU01000003
[OKNU] human gut metagenome; human gut
266013
265938
-
Phe
GAA
[ENA]
¢þ
>WENV182857098
OKNU01000004
[OKNU] human gut metagenome; human gut
323679
323603
-
Arg
TCT
[ENA]
¢þ
>WENV182857085
OKNU01000003
[OKNU] human gut metagenome; human gut
353702
353775
+
Gly
CCC
[ENA]
¢þ
>WENV182857080
OKNU01000002
[OKNU] human gut metagenome; human gut
383726
383651
-
Asn
GTT
[ENA]
¢þ
>WENV182857073
OKNU01000002
[OKNU] human gut metagenome; human gut
385483
385558
+
Asn
GTT
[ENA]
¢þ
>WENV182857079
OKNU01000002
[OKNU] human gut metagenome; human gut
394386
394311
-
Asn
GTT
[ENA]
¢þ
>WENV182857078
OKNU01000002
[OKNU] human gut metagenome; human gut
397876
397801
-
Asn
GTT
[ENA]
¢þ
>WENV182857074
OKNU01000002
[OKNU] human gut metagenome; human gut
398868
398957
+
Ser
CGA
[ENA]
¢þ
>WENV182857075
OKNU01000002
[OKNU] human gut metagenome; human gut
420058
420133
+
Gly
GCC
[ENA]
¢þ
>WENV182857076
OKNU01000002
[OKNU] human gut metagenome; human gut
420174
420247
+
Cys
GCA
[ENA]
¢þ
>WENV182857077
OKNU01000002
[OKNU] human gut metagenome; human gut
420261
420347
+
Leu
TAA
[ENA]
¢þ
>WENV182857088
OKNU01000003
[OKNU] human gut metagenome; human gut
491568
491492
-
fMet
CAT
[ENA]
¢þ
>WENV182857087
OKNU01000003
[OKNU] human gut metagenome; human gut
491677
491601
-
fMet
CAT
[ENA]
¢þ
>WENV182857086
OKNU01000003
[OKNU] human gut metagenome; human gut
491786
491710
-
fMet
CAT
[ENA]
¢þ
>WENV182857068
OKNU01000001
[OKNU] human gut metagenome; human gut
492617
492704
+
Ser
GGA
[ENA]
¢þ
>WENV182857069
OKNU01000001
[OKNU] human gut metagenome; human gut
495698
495785
+
Ser
GGA
[ENA]
¢þ
>WENV182857070
OKNU01000001
[OKNU] human gut metagenome; human gut
558299
558212
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK