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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OLBI] human gut metagenome; human gut
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182995648
OLBI01002850
[OLBI] human gut metagenome; human gut
27
98
+
Gln
TTG
[ENA]
¢þ
>WENV182995685
OLBI01006341
[OLBI] human gut metagenome; human gut
29
105
+
Pro
TGG
[ENA]
¢þ
>WENV182995668
OLBI01003966
[OLBI] human gut metagenome; human gut
31
106
+
Ala
TGC
[ENA]
¢þ
>WENV182995617
OLBI01000926
[OLBI] human gut metagenome; human gut
32
117
+
Tyr
GTA
[ENA]
¢þ
>WENV182995655
OLBI01002966
[OLBI] human gut metagenome; human gut
58
133
+
Asp
GTC
[ENA]
¢þ
>WENV182995680
OLBI01005705
[OLBI] human gut metagenome; human gut
60
134
+
Arg
CCG
[ENA]
¢þ
>WENV182995654
OLBI01002960
[OLBI] human gut metagenome; human gut
66
138
+
Thr
GGT
[ENA]
¢þ
>WENV182995609
OLBI01000747
[OLBI] human gut metagenome; human gut
97
181
+
Leu
GAG
[ENA]
¢þ
>WENV182995695
OLBI01007495
[OLBI] human gut metagenome; human gut
117
208
+
Ser
GCT
[ENA]
¢þ
>WENV182995684
OLBI01006283
[OLBI] human gut metagenome; human gut
128
55
-
Cys
GCA
[ENA]
¢þ
>WENV182995686
OLBI01006495
[OLBI] human gut metagenome; human gut
137
54
-
Tyr
GTA
[ENA]
¢þ
>WENV182995656
OLBI01002966
[OLBI] human gut metagenome; human gut
138
212
+
Val
TAC
[ENA]
¢þ
>WENV182995692
OLBI01007264
[OLBI] human gut metagenome; human gut
148
223
+
Gly
CCC
[ENA]
¢þ
>WENV182995625
OLBI01001722
[OLBI] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¢þ
>WENV182995667
OLBI01003780
[OLBI] human gut metagenome; human gut
156
80
-
Ile
GAT
[ENA]
¢þ
>WENV182995676
OLBI01004279
[OLBI] human gut metagenome; human gut
170
83
-
Ser
GCT
[ENA]
¢þ
>WENV182995688
OLBI01006872
[OLBI] human gut metagenome; human gut
172
81
-
Ser
CGA
[ENA]
¢þ
>WENV182995694
OLBI01007477
[OLBI] human gut metagenome; human gut
181
110
-
Gln
CTG
[ENA]
¢þ
>WENV182995605
OLBI01000682
[OLBI] human gut metagenome; human gut
182
256
+
Ile
GAT
[ENA]
¢þ
>WENV182995610
OLBI01000747
[OLBI] human gut metagenome; human gut
188
265
+
Gln
CTG
[ENA]
¢þ
>WENV182995629
OLBI01001956
[OLBI] human gut metagenome; human gut
196
121
-
Ala
CGC
[ENA]
¢þ
>WENV182995683
OLBI01006283
[OLBI] human gut metagenome; human gut
206
132
-
Gly
GCC
[ENA]
¢þ
>WENV182995689
OLBI01006981
[OLBI] human gut metagenome; human gut
206
283
+
Gln
TTG
[ENA]
¢þ
>WENV182995618
OLBI01000926
[OLBI] human gut metagenome; human gut
218
292
+
Thr
GGT
[ENA]
¢þ
>WENV182995633
OLBI01002020
[OLBI] human gut metagenome; human gut
223
295
+
Arg
CCT
[ENA]
¢þ
>WENV182995679
OLBI01005058
[OLBI] human gut metagenome; human gut
227
300
+
Pro
CGG
[ENA]
¢þ
>WENV182995649
OLBI01002850
[OLBI] human gut metagenome; human gut
258
331
+
His
GTG
[ENA]
¢þ
>WENV182995669
OLBI01004043
[OLBI] human gut metagenome; human gut
266
183
-
Leu
GAG
[ENA]
¢þ
>WENV182995606
OLBI01000682
[OLBI] human gut metagenome; human gut
273
347
+
Ala
TGC
[ENA]
¢þ
>WENV182995624
OLBI01001576
[OLBI] human gut metagenome; human gut
274
200
-
Arg
TCT
[ENA]
¢þ
>WENV182995682
OLBI01006283
[OLBI] human gut metagenome; human gut
285
209
-
Asp
GTC
[ENA]
¢þ
>WENV182995693
OLBI01007367
[OLBI] human gut metagenome; human gut
298
222
-
Ile2
CAT
[ENA]
¢þ
>WENV182995634
OLBI01002155
[OLBI] human gut metagenome; human gut
305
387
+
Leu
TAG
[ENA]
¢þ
>WENV182995650
OLBI01002850
[OLBI] human gut metagenome; human gut
336
410
+
Thr
TGT
[ENA]
¢þ
>WENV182995631
OLBI01001982
[OLBI] human gut metagenome; human gut
346
274
-
Cys
GCA
[ENA]
¢þ
>WENV182995666
OLBI01003335
[OLBI] human gut metagenome; human gut
347
271
-
Val
GAC
[ENA]
¢þ
>WENV182995675
OLBI01004251
[OLBI] human gut metagenome; human gut
360
285
-
Val
TAC
[ENA]
¢þ
>WENV182995644
OLBI01002507
[OLBI] human gut metagenome; human gut
379
455
+
Pro
TGG
[ENA]
¢þ
>WENV182995652
OLBI01002936
[OLBI] human gut metagenome; human gut
380
307
-
Trp
CCA
[ENA]
¢þ
>WENV182995657
OLBI01002966
[OLBI] human gut metagenome; human gut
397
471
+
Glu
CTC
[ENA]
¢þ
>WENV182995647
OLBI01002807
[OLBI] human gut metagenome; human gut
408
333
-
Glu
CTC
[ENA]
¢þ
>WENV182995642
OLBI01002206
[OLBI] human gut metagenome; human gut
419
333
-
Leu
CAG
[ENA]
¢þ
>WENV182995653
OLBI01002938
[OLBI] human gut metagenome; human gut
430
506
+
Pro
GGG
[ENA]
¢þ
>WENV182995674
OLBI01004251
[OLBI] human gut metagenome; human gut
436
362
-
Glu
TTC
[ENA]
¢þ
>WENV182995659
OLBI01003029
[OLBI] human gut metagenome; human gut
437
527
+
Ser
GCT
[ENA]
¢þ
>WENV182995691
OLBI01007062
[OLBI] human gut metagenome; human gut
440
367
-
Pro
CGG
[ENA]
¢þ
>WENV182995601
OLBI01000533
[OLBI] human gut metagenome; human gut
454
382
-
Glu
TTC
[ENA]
¢þ
>WENV182995681
OLBI01006036
[OLBI] human gut metagenome; human gut
459
384
-
Val
GAC
[ENA]
¢þ
>WENV182995645
OLBI01002507
[OLBI] human gut metagenome; human gut
460
534
+
Gln
TTG
[ENA]
¢þ
>WENV182995678
OLBI01004799
[OLBI] human gut metagenome; human gut
464
540
+
Val
GAC
[ENA]
¢þ
>WENV182995696
OLBI01007495
[OLBI] human gut metagenome; human gut
474
400
-
Gly
TCC
[ENA]
¢þ
>WENV182995697
OLBI01007805
[OLBI] human gut metagenome; human gut
486
410
-
His
GTG
[ENA]
¢þ
>WENV182995641
OLBI01002206
[OLBI] human gut metagenome; human gut
507
432
-
Lys
TTT
[ENA]
¢þ
>WENV182995660
OLBI01003115
[OLBI] human gut metagenome; human gut
508
594
+
Leu
TAG
[ENA]
¢þ
>WENV182995658
OLBI01002966
[OLBI] human gut metagenome; human gut
512
588
+
Asn
GTT
[ENA]
¢þ
>WENV182995673
OLBI01004251
[OLBI] human gut metagenome; human gut
517
442
-
Lys
TTT
[ENA]
¢þ
>WENV182995687
OLBI01006607
[OLBI] human gut metagenome; human gut
525
437
-
Leu
TAA
[ENA]
¢þ
>WENV182995690
OLBI01007062
[OLBI] human gut metagenome; human gut
543
470
-
Gln
CTG
[ENA]
¢þ
>WENV182995630
OLBI01001980
[OLBI] human gut metagenome; human gut
552
466
-
Leu
CAG
[ENA]
¢þ
>WENV182995627
OLBI01001884
[OLBI] human gut metagenome; human gut
583
656
+
Gly
GCC
[ENA]
¢þ
>WENV182995640
OLBI01002206
[OLBI] human gut metagenome; human gut
592
517
-
Gly
TCC
[ENA]
¢þ
>WENV182995672
OLBI01004251
[OLBI] human gut metagenome; human gut
597
523
-
Gln
CTG
[ENA]
¢þ
>WENV182995670
OLBI01004203
[OLBI] human gut metagenome; human gut
613
539
-
Val
CAC
[ENA]
¢þ
>WENV182995677
OLBI01004328
[OLBI] human gut metagenome; human gut
614
700
+
Ser
CGA
[ENA]
¢þ
>WENV182995628
OLBI01001884
[OLBI] human gut metagenome; human gut
672
757
+
Leu
TAA
[ENA]
¢þ
>WENV182995671
OLBI01004251
[OLBI] human gut metagenome; human gut
675
600
-
Asn
GTT
[ENA]
¢þ
>WENV182995663
OLBI01003148
[OLBI] human gut metagenome; human gut
692
768
+
Pro
TGG
[ENA]
¢þ
>WENV182995604
OLBI01000642
[OLBI] human gut metagenome; human gut
718
636
-
Leu
TAG
[ENA]
¢þ
>WENV182995639
OLBI01002206
[OLBI] human gut metagenome; human gut
718
645
-
Cys
GCA
[ENA]
¢þ
>WENV182995661
OLBI01003130
[OLBI] human gut metagenome; human gut
731
806
+
Gly
GCC
[ENA]
¢þ
>WENV182995665
OLBI01003248
[OLBI] human gut metagenome; human gut
743
817
+
Pro
GGG
[ENA]
¢þ
>WENV182995646
OLBI01002542
[OLBI] human gut metagenome; human gut
761
686
-
Val
TAC
[ENA]
¢þ
>WENV182995664
OLBI01003148
[OLBI] human gut metagenome; human gut
800
876
+
Arg
TCT
[ENA]
¢þ
>WENV182995638
OLBI01002206
[OLBI] human gut metagenome; human gut
809
734
-
Phe
GAA
[ENA]
¢þ
>WENV182995662
OLBI01003130
[OLBI] human gut metagenome; human gut
814
887
+
Cys
GCA
[ENA]
¢þ
>WENV182995594
OLBI01000283
[OLBI] human gut metagenome; human gut
828
756
-
Arg
CCG
[ENA]
¢þ
>WENV182995623
OLBI01001520
[OLBI] human gut metagenome; human gut
834
760
-
Ala
GGC
[ENA]
¢þ
>WENV182995643
OLBI01002352
[OLBI] human gut metagenome; human gut
885
970
+
Ser
TGA
[ENA]
¢þ
>WENV182995637
OLBI01002206
[OLBI] human gut metagenome; human gut
904
828
-
Asp
GTC
[ENA]
¢þ
>WENV182995626
OLBI01001856
[OLBI] human gut metagenome; human gut
905
981
+
Arg
ACG
[ENA]
¢þ
>WENV182995651
OLBI01002893
[OLBI] human gut metagenome; human gut
918
846
-
Thr
TGT
[ENA]
¢þ
>WENV182995636
OLBI01002206
[OLBI] human gut metagenome; human gut
988
913
-
Val
TAC
[ENA]
¢þ
>WENV182995635
OLBI01002206
[OLBI] human gut metagenome; human gut
1067
993
-
Glu
TTC
[ENA]
¢þ
>WENV182995598
OLBI01000460
[OLBI] human gut metagenome; human gut
1135
1210
+
Pro
TGG
[ENA]
¢þ
>WENV182995622
OLBI01001426
[OLBI] human gut metagenome; human gut
1144
1219
+
Asn
GTT
[ENA]
¢þ
>WENV182995632
OLBI01002018
[OLBI] human gut metagenome; human gut
1197
1109
-
Ser
GGA
[ENA]
¢þ
>WENV182995597
OLBI01000455
[OLBI] human gut metagenome; human gut
1203
1276
+
Phe
GAA
[ENA]
¢þ
>WENV182995596
OLBI01000446
[OLBI] human gut metagenome; human gut
1299
1225
-
Ile2
CAT
[ENA]
¢þ
>WENV182995615
OLBI01000823
[OLBI] human gut metagenome; human gut
1349
1432
+
Leu
TAG
[ENA]
¢þ
>WENV182995614
OLBI01000789
[OLBI] human gut metagenome; human gut
1394
1321
-
Gly
GCC
[ENA]
¢þ
>WENV182995621
OLBI01001395
[OLBI] human gut metagenome; human gut
1413
1497
+
Leu
CAA
[ENA]
¢þ
>WENV182995616
OLBI01000858
[OLBI] human gut metagenome; human gut
1600
1671
+
Gln
TTG
[ENA]
¢þ
>WENV182995619
OLBI01000926
[OLBI] human gut metagenome; human gut
1614
1689
+
Trp
CCA
[ENA]
¢þ
>WENV182995620
OLBI01000959
[OLBI] human gut metagenome; human gut
1762
1837
+
Pro
GGG
[ENA]
¢þ
>WENV182995602
OLBI01000596
[OLBI] human gut metagenome; human gut
1838
1911
+
fMet
CAT
[ENA]
¢þ
>WENV182995611
OLBI01000757
[OLBI] human gut metagenome; human gut
1862
1937
+
Arg
ACG
[ENA]
¢þ
>WENV182995612
OLBI01000757
[OLBI] human gut metagenome; human gut
1944
2030
+
Ser
TGA
[ENA]
¢þ
>WENV182995613
OLBI01000757
[OLBI] human gut metagenome; human gut
2036
2107
+
Gln
CTG
[ENA]
¢þ
>WENV182995591
OLBI01000161
[OLBI] human gut metagenome; human gut
2106
2035
-
Gln
CTG
[ENA]
¢þ
>WENV182995608
OLBI01000727
[OLBI] human gut metagenome; human gut
2187
2112
-
Ala
TGC
[ENA]
¢þ
>WENV182995607
OLBI01000727
[OLBI] human gut metagenome; human gut
2314
2238
-
Ile
GAT
[ENA]
¢þ
>WENV182995603
OLBI01000600
[OLBI] human gut metagenome; human gut
2447
2521
+
Met
CAT
[ENA]
¢þ
>WENV182995589
OLBI01000045
[OLBI] human gut metagenome; human gut
2510
2583
+
Trp
CCA
[ENA]
¢þ
>WENV182995587
OLBI01000041
[OLBI] human gut metagenome; human gut
2590
2664
+
Thr
TGT
[ENA]
¢þ
>WENV182995588
OLBI01000041
[OLBI] human gut metagenome; human gut
2707
2790
+
Tyr
GTA
[ENA]
¢þ
>WENV182995600
OLBI01000490
[OLBI] human gut metagenome; human gut
2723
2649
-
Glu
CTC
[ENA]
¢þ
>WENV182995595
OLBI01000325
[OLBI] human gut metagenome; human gut
2907
2834
-
Lys
TTT
[ENA]
¢þ
>WENV182995599
OLBI01000461
[OLBI] human gut metagenome; human gut
2957
2881
-
Val
TAC
[ENA]
¢þ
>WENV182995593
OLBI01000229
[OLBI] human gut metagenome; human gut
3397
3324
-
Phe
GAA
[ENA]
¢þ
>WENV182995590
OLBI01000079
[OLBI] human gut metagenome; human gut
3454
3526
+
Arg
CCT
[ENA]
¢þ
>WENV182995592
OLBI01000221
[OLBI] human gut metagenome; human gut
3910
3984
+
Asp
GTC
[ENA]
¢þ
>WENV182995583
OLBI01000025
[OLBI] human gut metagenome; human gut
6395
6322
-
Thr
CGT
[ENA]
¢þ
>WENV182995584
OLBI01000028
[OLBI] human gut metagenome; human gut
6552
6478
-
Glu
TTC
[ENA]
¢þ
>WENV182995586
OLBI01000034
[OLBI] human gut metagenome; human gut
8405
8330
-
His
GTG
[ENA]
¢þ
>WENV182995585
OLBI01000029
[OLBI] human gut metagenome; human gut
8567
8496
-
Gln
TTG
[ENA]
¢þ
>WENV182995582
OLBI01000023
[OLBI] human gut metagenome; human gut
10121
10193
+
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK