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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLBN] human gut metagenome; human gut
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182996789
OLBN01002760
[OLBN] human gut metagenome; human gut
20
104
+
Tyr
GTA
[ENA]
¢þ
>WENV182996799
OLBN01004704
[OLBN] human gut metagenome; human gut
35
111
+
Asn
GTT
[ENA]
¢þ
>WENV182996755
OLBN01000307
[OLBN] human gut metagenome; human gut
65
137
+
Thr
GGT
[ENA]
¢þ
>WENV182996792
OLBN01003150
[OLBN] human gut metagenome; human gut
113
40
-
fMet
CAT
[ENA]
¢þ
>WENV182996783
OLBN01001829
[OLBN] human gut metagenome; human gut
114
26
-
Leu
TAA
[ENA]
¢þ
>WENV182996795
OLBN01004016
[OLBN] human gut metagenome; human gut
123
44
-
Leu
CAA
[ENA]
¢þ
>WENV182996772
OLBN01001620
[OLBN] human gut metagenome; human gut
130
203
+
Gln
CTG
[ENA]
¢þ
>WENV182996796
OLBN01004357
[OLBN] human gut metagenome; human gut
164
239
+
Phe
GAA
[ENA]
¢þ
>WENV182996781
OLBN01001650
[OLBN] human gut metagenome; human gut
165
89
-
His
GTG
[ENA]
¢þ
>WENV182996798
OLBN01004377
[OLBN] human gut metagenome; human gut
174
81
-
Ser
GCT
[ENA]
¢þ
>WENV182996787
OLBN01002167
[OLBN] human gut metagenome; human gut
188
264
+
Arg
TCT
[ENA]
¢þ
>WENV182996784
OLBN01001884
[OLBN] human gut metagenome; human gut
217
293
+
Pro
TGG
[ENA]
¢þ
>WENV182996774
OLBN01001631
[OLBN] human gut metagenome; human gut
219
291
+
Asn
GTT
[ENA]
¢þ
>WENV182996754
OLBN01000268
[OLBN] human gut metagenome; human gut
223
149
-
Cys
GCA
[ENA]
¢þ
>WENV182996724
OLBN01000050
[OLBN] human gut metagenome; human gut
232
157
-
His
GTG
[ENA]
¢þ
>WENV182996773
OLBN01001620
[OLBN] human gut metagenome; human gut
233
306
+
Pro
CGG
[ENA]
¢þ
>WENV182996780
OLBN01001650
[OLBN] human gut metagenome; human gut
248
173
-
Arg
TCT
[ENA]
¢þ
>WENV182996788
OLBN01002289
[OLBN] human gut metagenome; human gut
255
181
-
fMet
CAT
[ENA]
¢þ
>WENV182996791
OLBN01003035
[OLBN] human gut metagenome; human gut
272
363
+
Ser
GGA
[ENA]
¢þ
>WENV182996797
OLBN01004377
[OLBN] human gut metagenome; human gut
293
206
-
Ser
TGA
[ENA]
¢þ
>WENV182996775
OLBN01001631
[OLBN] human gut metagenome; human gut
296
369
+
Glu
TTC
[ENA]
¢þ
>WENV182996726
OLBN01000061
[OLBN] human gut metagenome; human gut
298
223
-
Pro
TGG
[ENA]
¢þ
>WENV182996769
OLBN01001472
[OLBN] human gut metagenome; human gut
304
388
+
Leu
AAG
[ENA]
¢þ
>WENV182996785
OLBN01001884
[OLBN] human gut metagenome; human gut
325
401
+
Arg
TCT
[ENA]
¢þ
>WENV182996765
OLBN01000814
[OLBN] human gut metagenome; human gut
340
267
-
Ala
TGC
[ENA]
¢þ
>WENV182996767
OLBN01001186
[OLBN] human gut metagenome; human gut
354
445
+
Ser
CGA
[ENA]
¢þ
>WENV182996776
OLBN01001631
[OLBN] human gut metagenome; human gut
403
475
+
Thr
TGT
[ENA]
¢þ
>WENV182996786
OLBN01001884
[OLBN] human gut metagenome; human gut
414
489
+
His
GTG
[ENA]
¢þ
>WENV182996735
OLBN01000150
[OLBN] human gut metagenome; human gut
424
497
+
Thr
CGT
[ENA]
¢þ
>WENV182996793
OLBN01003158
[OLBN] human gut metagenome; human gut
427
354
-
Thr
CGT
[ENA]
¢þ
>WENV182996790
OLBN01002987
[OLBN] human gut metagenome; human gut
429
353
-
Val
CAC
[ENA]
¢þ
>WENV182996764
OLBN01000814
[OLBN] human gut metagenome; human gut
432
359
-
Ile
GAT
[ENA]
¢þ
>WENV182996777
OLBN01001631
[OLBN] human gut metagenome; human gut
500
575
+
fMet
CAT
[ENA]
¢þ
>WENV182996794
OLBN01003269
[OLBN] human gut metagenome; human gut
501
419
-
Leu
TAG
[ENA]
¢þ
>WENV182996738
OLBN01000201
[OLBN] human gut metagenome; human gut
511
436
-
Gly
CCC
[ENA]
¢þ
>WENV182996782
OLBN01001722
[OLBN] human gut metagenome; human gut
550
476
-
Thr
GGT
[ENA]
¢þ
>WENV182996770
OLBN01001472
[OLBN] human gut metagenome; human gut
574
500
-
Pro
TGG
[ENA]
¢þ
>WENV182996778
OLBN01001631
[OLBN] human gut metagenome; human gut
578
652
+
Phe
GAA
[ENA]
¢þ
>WENV182996758
OLBN01000397
[OLBN] human gut metagenome; human gut
607
681
+
Ile
GAT
[ENA]
¢þ
>WENV182996729
OLBN01000082
[OLBN] human gut metagenome; human gut
649
736
+
Ser
GCT
[ENA]
¢þ
>WENV182996779
OLBN01001631
[OLBN] human gut metagenome; human gut
687
759
+
Lys
TTT
[ENA]
¢þ
>WENV182996759
OLBN01000397
[OLBN] human gut metagenome; human gut
691
765
+
Ala
TGC
[ENA]
¢þ
>WENV182996768
OLBN01001427
[OLBN] human gut metagenome; human gut
709
785
+
Met
CAT
[ENA]
¢þ
>WENV182996771
OLBN01001500
[OLBN] human gut metagenome; human gut
761
687
-
Ile2
CAT
[ENA]
¢þ
>WENV182996766
OLBN01000862
[OLBN] human gut metagenome; human gut
905
981
+
Arg
CCG
[ENA]
¢þ
>WENV182996730
OLBN01000082
[OLBN] human gut metagenome; human gut
1091
1165
+
Glu
CTC
[ENA]
¢þ
>WENV182996760
OLBN01000451
[OLBN] human gut metagenome; human gut
1148
1076
-
Glu
TTC
[ENA]
¢þ
>WENV182996762
OLBN01000585
[OLBN] human gut metagenome; human gut
1316
1400
+
Leu
CAA
[ENA]
¢þ
>WENV182996763
OLBN01000642
[OLBN] human gut metagenome; human gut
1386
1312
-
Thr
GGT
[ENA]
¢þ
>WENV182996756
OLBN01000307
[OLBN] human gut metagenome; human gut
1430
1503
+
Trp
CCA
[ENA]
¢þ
>WENV182996728
OLBN01000076
[OLBN] human gut metagenome; human gut
1509
1583
+
Ile2
CAT
[ENA]
¢þ
>WENV182996747
OLBN01000202
[OLBN] human gut metagenome; human gut
1691
1617
-
Thr
TGT
[ENA]
¢þ
>WENV182996746
OLBN01000202
[OLBN] human gut metagenome; human gut
1769
1696
-
His
GTG
[ENA]
¢þ
>WENV182996722
OLBN01000038
[OLBN] human gut metagenome; human gut
1774
1848
+
Thr
TGT
[ENA]
¢þ
>WENV182996745
OLBN01000202
[OLBN] human gut metagenome; human gut
1846
1775
-
Arg
TCG
[ENA]
¢þ
>WENV182996744
OLBN01000202
[OLBN] human gut metagenome; human gut
1930
1859
-
Gln
TTG
[ENA]
¢þ
>WENV182996727
OLBN01000075
[OLBN] human gut metagenome; human gut
1952
2026
+
Ala
GGC
[ENA]
¢þ
>WENV182996761
OLBN01000453
[OLBN] human gut metagenome; human gut
2060
2145
+
Ser
TGA
[ENA]
¢þ
>WENV182996743
OLBN01000202
[OLBN] human gut metagenome; human gut
2121
2048
-
Phe
GAA
[ENA]
¢þ
>WENV182996736
OLBN01000171
[OLBN] human gut metagenome; human gut
2164
2090
-
Arg
TCT
[ENA]
¢þ
>WENV182996742
OLBN01000202
[OLBN] human gut metagenome; human gut
2201
2130
-
Gln
CTG
[ENA]
¢þ
>WENV182996741
OLBN01000202
[OLBN] human gut metagenome; human gut
2293
2207
-
Ser
TGA
[ENA]
¢þ
>WENV182996740
OLBN01000202
[OLBN] human gut metagenome; human gut
2375
2300
-
Arg
ACG
[ENA]
¢þ
>WENV182996739
OLBN01000202
[OLBN] human gut metagenome; human gut
2466
2381
-
Ser
GCT
[ENA]
¢þ
>WENV182996757
OLBN01000348
[OLBN] human gut metagenome; human gut
3037
2962
-
Ala
TGC
[ENA]
¢þ
>WENV182996733
OLBN01000093
[OLBN] human gut metagenome; human gut
3555
3472
-
Tyr
GTA
[ENA]
¢þ
>WENV182996750
OLBN01000223
[OLBN] human gut metagenome; human gut
4110
4025
-
Ser
TGA
[ENA]
¢þ
>WENV182996737
OLBN01000181
[OLBN] human gut metagenome; human gut
5018
4945
-
Trp
CCA
[ENA]
¢þ
>WENV182996732
OLBN01000091
[OLBN] human gut metagenome; human gut
5920
5845
-
Pro
GGG
[ENA]
¢þ
>WENV182996751
OLBN01000230
[OLBN] human gut metagenome; human gut
6755
6828
+
Lys
CTT
[ENA]
¢þ
>WENV182996752
OLBN01000230
[OLBN] human gut metagenome; human gut
6852
6925
+
Lys
CTT
[ENA]
¢þ
>WENV182996753
OLBN01000230
[OLBN] human gut metagenome; human gut
6945
7018
+
Lys
CTT
[ENA]
¢þ
>WENV182996748
OLBN01000204
[OLBN] human gut metagenome; human gut
7756
7830
+
Met
CAT
[ENA]
¢þ
>WENV182996749
OLBN01000204
[OLBN] human gut metagenome; human gut
7891
7965
+
Met
CAT
[ENA]
¢þ
>WENV182996734
OLBN01000142
[OLBN] human gut metagenome; human gut
11321
11409
+
Ser
GGA
[ENA]
¢þ
>WENV182996710
OLBN01000003
[OLBN] human gut metagenome; human gut
11824
11739
-
Leu
TAA
[ENA]
¢þ
>WENV182996709
OLBN01000003
[OLBN] human gut metagenome; human gut
11913
11840
-
Gly
GCC
[ENA]
¢þ
>WENV182996718
OLBN01000005
[OLBN] human gut metagenome; human gut
13711
13782
+
Gln
TTG
[ENA]
¢þ
>WENV182996725
OLBN01000055
[OLBN] human gut metagenome; human gut
15168
15242
+
Thr
TGT
[ENA]
¢þ
>WENV182996731
OLBN01000089
[OLBN] human gut metagenome; human gut
17137
17208
+
Gln
CTG
[ENA]
¢þ
>WENV182996721
OLBN01000023
[OLBN] human gut metagenome; human gut
20645
20573
-
Arg
CCG
[ENA]
¢þ
>WENV182996719
OLBN01000009
[OLBN] human gut metagenome; human gut
21702
21790
+
Ser
GGA
[ENA]
¢þ
>WENV182996723
OLBN01000044
[OLBN] human gut metagenome; human gut
25625
25707
+
Leu
TAG
[ENA]
¢þ
>WENV182996720
OLBN01000010
[OLBN] human gut metagenome; human gut
35241
35317
+
Val
TAC
[ENA]
¢þ
>WENV182996717
OLBN01000004
[OLBN] human gut metagenome; human gut
45343
45261
-
Tyr
GTA
[ENA]
¢þ
>WENV182996716
OLBN01000004
[OLBN] human gut metagenome; human gut
45579
45507
-
Glu
TTC
[ENA]
¢þ
>WENV182996715
OLBN01000004
[OLBN] human gut metagenome; human gut
45655
45584
-
Gln
TTG
[ENA]
¢þ
>WENV182996714
OLBN01000004
[OLBN] human gut metagenome; human gut
45733
45660
-
Trp
CCA
[ENA]
¢þ
>WENV182996713
OLBN01000004
[OLBN] human gut metagenome; human gut
45813
45740
-
Asn
GTT
[ENA]
¢þ
>WENV182996712
OLBN01000004
[OLBN] human gut metagenome; human gut
46104
46031
-
fMet
CAT
[ENA]
¢þ
>WENV182996707
OLBN01000001
[OLBN] human gut metagenome; human gut
58143
58070
-
Pro
CGG
[ENA]
¢þ
>WENV182996706
OLBN01000001
[OLBN] human gut metagenome; human gut
58324
58399
+
Phe
GAA
[ENA]
¢þ
>WENV182996708
OLBN01000003
[OLBN] human gut metagenome; human gut
64161
64233
+
Arg
CCT
[ENA]
¢þ
>WENV182996711
OLBN01000004
[OLBN] human gut metagenome; human gut
64619
64545
-
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK