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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OLBY] human gut metagenome; human gut
HIT:
140 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182999433
OLBY01000499
[OLBY] human gut metagenome; human gut
7
82
+
Thr
CGT
[ENA]
¢þ
>WENV182999491
OLBY01006668
[OLBY] human gut metagenome; human gut
14
88
+
fMet
CAT
[ENA]
¢þ
>WENV182999431
OLBY01000404
[OLBY] human gut metagenome; human gut
41
116
+
Trp
CCA
[ENA]
¢þ
>WENV182999457
OLBY01002530
[OLBY] human gut metagenome; human gut
65
141
+
Arg
TCT
[ENA]
¢þ
>WENV182999394
OLBY01000110
[OLBY] human gut metagenome; human gut
66
138
+
Thr
GGT
[ENA]
¢þ
>WENV182999450
OLBY01002175
[OLBY] human gut metagenome; human gut
69
142
+
Ala
TGC
[ENA]
¢þ
>WENV182999438
OLBY01000994
[OLBY] human gut metagenome; human gut
85
159
+
Cys
GCA
[ENA]
¢þ
>WENV182999492
OLBY01006668
[OLBY] human gut metagenome; human gut
107
181
+
Phe
GAA
[ENA]
¢þ
>WENV182999439
OLBY01001066
[OLBY] human gut metagenome; human gut
110
34
-
Pro
CGG
[ENA]
¢þ
>WENV182999463
OLBY01002599
[OLBY] human gut metagenome; human gut
118
193
+
Ala
TGC
[ENA]
¢þ
>WENV182999475
OLBY01003774
[OLBY] human gut metagenome; human gut
135
209
+
Phe
GAA
[ENA]
¢þ
>WENV182999494
OLBY01007464
[OLBY] human gut metagenome; human gut
141
54
-
Leu
AAG
[ENA]
¢þ
>WENV182999384
OLBY01000049
[OLBY] human gut metagenome; human gut
147
74
-
Lys
CTT
[ENA]
¢þ
>WENV182999443
OLBY01001207
[OLBY] human gut metagenome; human gut
161
237
+
Pro
GGG
[ENA]
¢þ
>WENV182999464
OLBY01002841
[OLBY] human gut metagenome; human gut
169
244
+
Asp
GTC
[ENA]
¢þ
>WENV182999478
OLBY01003804
[OLBY] human gut metagenome; human gut
206
132
-
Thr
TGT
[ENA]
¢þ
>WENV182999452
OLBY01002339
[OLBY] human gut metagenome; human gut
213
138
-
Arg
CCT
[ENA]
¢þ
>WENV182999476
OLBY01003774
[OLBY] human gut metagenome; human gut
215
285
+
Gly
TCC
[ENA]
¢þ
>WENV182999487
OLBY01006143
[OLBY] human gut metagenome; human gut
218
304
+
Leu
CAG
[ENA]
¢þ
>WENV182999454
OLBY01002354
[OLBY] human gut metagenome; human gut
224
299
+
Trp
CCA
[ENA]
¢þ
>WENV182999496
OLBY01008411
[OLBY] human gut metagenome; human gut
227
313
+
Leu
GAG
[ENA]
¢þ
>WENV182999383
OLBY01000049
[OLBY] human gut metagenome; human gut
244
171
-
Lys
CTT
[ENA]
¢þ
>WENV182999448
OLBY01001783
[OLBY] human gut metagenome; human gut
261
187
-
Thr
GGT
[ENA]
¢þ
>WENV182999465
OLBY01002841
[OLBY] human gut metagenome; human gut
271
358
+
Leu
TAA
[ENA]
¢þ
>WENV182999489
OLBY01006321
[OLBY] human gut metagenome; human gut
278
189
-
Ser
GCT
[ENA]
¢þ
>WENV182999477
OLBY01003774
[OLBY] human gut metagenome; human gut
290
365
+
Arg
TCT
[ENA]
¢þ
>WENV182999379
OLBY01000043
[OLBY] human gut metagenome; human gut
336
410
+
Glu
CTC
[ENA]
¢þ
>WENV182999481
OLBY01004371
[OLBY] human gut metagenome; human gut
382
307
-
Thr
CGT
[ENA]
¢þ
>WENV182999437
OLBY01000852
[OLBY] human gut metagenome; human gut
383
458
+
Lys
CTT
[ENA]
¢þ
>WENV182999479
OLBY01004021
[OLBY] human gut metagenome; human gut
388
316
-
Gln
CTG
[ENA]
¢þ
>WENV182999470
OLBY01003184
[OLBY] human gut metagenome; human gut
400
495
+
SeC
TCA
[ENA]
¢þ
>WENV182999466
OLBY01003130
[OLBY] human gut metagenome; human gut
402
477
+
Thr
TGT
[ENA]
¢þ
>WENV182999441
OLBY01001072
[OLBY] human gut metagenome; human gut
406
315
-
Ser
GGA
[ENA]
¢þ
>WENV182999486
OLBY01005705
[OLBY] human gut metagenome; human gut
408
495
+
Ser
GGA
[ENA]
¢þ
>WENV182999485
OLBY01004925
[OLBY] human gut metagenome; human gut
424
497
+
Ala
CGC
[ENA]
¢þ
>WENV182999483
OLBY01004608
[OLBY] human gut metagenome; human gut
438
354
-
Tyr
GTA
[ENA]
¢þ
>WENV182999451
OLBY01002175
[OLBY] human gut metagenome; human gut
471
398
-
Asn
GTT
[ENA]
¢þ
>WENV182999453
OLBY01002340
[OLBY] human gut metagenome; human gut
479
554
+
Thr
CGT
[ENA]
¢þ
>WENV182999467
OLBY01003130
[OLBY] human gut metagenome; human gut
486
570
+
Tyr
GTA
[ENA]
¢þ
>WENV182999440
OLBY01001072
[OLBY] human gut metagenome; human gut
500
413
-
Ser
TGA
[ENA]
¢þ
>WENV182999484
OLBY01004880
[OLBY] human gut metagenome; human gut
525
614
+
Ser
GCT
[ENA]
¢þ
>WENV182999445
OLBY01001495
[OLBY] human gut metagenome; human gut
529
454
-
Phe
GAA
[ENA]
¢þ
>WENV182999495
OLBY01007708
[OLBY] human gut metagenome; human gut
532
459
-
Gln
TTG
[ENA]
¢þ
>WENV182999458
OLBY01002548
[OLBY] human gut metagenome; human gut
532
624
+
Ser
GCT
[ENA]
¢þ
>WENV182999493
OLBY01006905
[OLBY] human gut metagenome; human gut
554
478
-
Ile
GAT
[ENA]
¢þ
>WENV182999490
OLBY01006497
[OLBY] human gut metagenome; human gut
556
482
-
Arg
CCT
[ENA]
¢þ
>WENV182999462
OLBY01002580
[OLBY] human gut metagenome; human gut
562
487
-
Asn
GTT
[ENA]
¢þ
>WENV182999456
OLBY01002500
[OLBY] human gut metagenome; human gut
568
493
-
Lys
TTT
[ENA]
¢þ
>WENV182999488
OLBY01006183
[OLBY] human gut metagenome; human gut
575
650
+
fMet
CAT
[ENA]
¢þ
>WENV182999471
OLBY01003437
[OLBY] human gut metagenome; human gut
576
503
-
Lys
TTT
[ENA]
¢þ
>WENV182999482
OLBY01004480
[OLBY] human gut metagenome; human gut
609
696
+
Ser
GCT
[ENA]
¢þ
>WENV182999459
OLBY01002548
[OLBY] human gut metagenome; human gut
628
704
+
Arg
ACG
[ENA]
¢þ
>WENV182999455
OLBY01002500
[OLBY] human gut metagenome; human gut
648
573
-
Val
TAC
[ENA]
¢þ
>WENV182999461
OLBY01002564
[OLBY] human gut metagenome; human gut
667
597
-
Gly
TCC
[ENA]
¢þ
>WENV182999473
OLBY01003573
[OLBY] human gut metagenome; human gut
675
602
-
Ile2
CAT
[ENA]
¢þ
>WENV182999468
OLBY01003130
[OLBY] human gut metagenome; human gut
687
761
+
Gly
TCC
[ENA]
¢þ
>WENV182999480
OLBY01004217
[OLBY] human gut metagenome; human gut
729
804
+
Ile2
CAT
[ENA]
¢þ
>WENV182999460
OLBY01002564
[OLBY] human gut metagenome; human gut
751
675
-
Pro
TGG
[ENA]
¢þ
>WENV182999469
OLBY01003130
[OLBY] human gut metagenome; human gut
768
843
+
Thr
GGT
[ENA]
¢þ
>WENV182999472
OLBY01003486
[OLBY] human gut metagenome; human gut
884
808
-
Arg
TCT
[ENA]
¢þ
>WENV182999474
OLBY01003679
[OLBY] human gut metagenome; human gut
892
817
-
Arg
CCT
[ENA]
¢þ
>WENV182999442
OLBY01001110
[OLBY] human gut metagenome; human gut
1046
1122
+
Val
CAC
[ENA]
¢þ
>WENV182999436
OLBY01000633
[OLBY] human gut metagenome; human gut
1202
1126
-
Arg
CCG
[ENA]
¢þ
>WENV182999402
OLBY01000127
[OLBY] human gut metagenome; human gut
1209
1296
+
Ser
TGA
[ENA]
¢þ
>WENV182999449
OLBY01002173
[OLBY] human gut metagenome; human gut
1286
1211
-
Gly
GCC
[ENA]
¢þ
>WENV182999403
OLBY01000127
[OLBY] human gut metagenome; human gut
1330
1423
+
Ser
GCT
[ENA]
¢þ
>WENV182999446
OLBY01001627
[OLBY] human gut metagenome; human gut
1372
1285
-
Ser
TGA
[ENA]
¢þ
>WENV182999395
OLBY01000110
[OLBY] human gut metagenome; human gut
1431
1504
+
Trp
CCA
[ENA]
¢þ
>WENV182999447
OLBY01001764
[OLBY] human gut metagenome; human gut
1548
1475
-
Lys
CTT
[ENA]
¢þ
>WENV182999435
OLBY01000563
[OLBY] human gut metagenome; human gut
1658
1586
-
Cys
GCA
[ENA]
¢þ
>WENV182999444
OLBY01001320
[OLBY] human gut metagenome; human gut
1731
1647
-
Leu
CAG
[ENA]
¢þ
>WENV182999434
OLBY01000563
[OLBY] human gut metagenome; human gut
1772
1701
-
Glu
TTC
[ENA]
¢þ
>WENV182999421
OLBY01000286
[OLBY] human gut metagenome; human gut
1828
1902
+
Ile
GAT
[ENA]
¢þ
>WENV182999422
OLBY01000286
[OLBY] human gut metagenome; human gut
1919
1993
+
Ala
TGC
[ENA]
¢þ
>WENV182999416
OLBY01000233
[OLBY] human gut metagenome; human gut
2025
1951
-
Gly
TCC
[ENA]
¢þ
>WENV182999427
OLBY01000378
[OLBY] human gut metagenome; human gut
2100
2176
+
fMet
CAT
[ENA]
¢þ
>WENV182999432
OLBY01000471
[OLBY] human gut metagenome; human gut
2143
2067
-
Asp
GTC
[ENA]
¢þ
>WENV182999423
OLBY01000301
[OLBY] human gut metagenome; human gut
2532
2605
+
Phe
GAA
[ENA]
¢þ
>WENV182999424
OLBY01000301
[OLBY] human gut metagenome; human gut
2613
2688
+
Gly
GCC
[ENA]
¢þ
>WENV182999407
OLBY01000163
[OLBY] human gut metagenome; human gut
2746
2675
-
Gln
TTG
[ENA]
¢þ
>WENV182999428
OLBY01000387
[OLBY] human gut metagenome; human gut
3054
3136
+
Leu
GAG
[ENA]
¢þ
>WENV182999430
OLBY01000399
[OLBY] human gut metagenome; human gut
3246
3152
-
SeC
TCA
[ENA]
¢þ
>WENV182999426
OLBY01000345
[OLBY] human gut metagenome; human gut
3268
3359
+
Ser
GGA
[ENA]
¢þ
>WENV182999429
OLBY01000387
[OLBY] human gut metagenome; human gut
3331
3250
-
Leu
TAG
[ENA]
¢þ
>WENV182999410
OLBY01000185
[OLBY] human gut metagenome; human gut
3389
3314
-
Glu
TTC
[ENA]
¢þ
>WENV182999419
OLBY01000279
[OLBY] human gut metagenome; human gut
3664
3737
+
Gln
CTG
[ENA]
¢þ
>WENV182999418
OLBY01000277
[OLBY] human gut metagenome; human gut
3748
3673
-
Pro
TGG
[ENA]
¢þ
>WENV182999420
OLBY01000279
[OLBY] human gut metagenome; human gut
3771
3846
+
Pro
CGG
[ENA]
¢þ
>WENV182999412
OLBY01000195
[OLBY] human gut metagenome; human gut
3916
3991
+
Arg
TCT
[ENA]
¢þ
>WENV182999413
OLBY01000195
[OLBY] human gut metagenome; human gut
4000
4074
+
His
GTG
[ENA]
¢þ
>WENV182999411
OLBY01000187
[OLBY] human gut metagenome; human gut
4122
4197
+
Gly
CCC
[ENA]
¢þ
>WENV182999414
OLBY01000195
[OLBY] human gut metagenome; human gut
4275
4361
+
Leu
CAG
[ENA]
¢þ
>WENV182999425
OLBY01000329
[OLBY] human gut metagenome; human gut
4362
4279
-
Leu
TAA
[ENA]
¢þ
>WENV182999393
OLBY01000102
[OLBY] human gut metagenome; human gut
4615
4700
+
Ser
TGA
[ENA]
¢þ
>WENV182999396
OLBY01000117
[OLBY] human gut metagenome; human gut
4938
5011
+
Ile2
CAT
[ENA]
¢þ
>WENV182999417
OLBY01000276
[OLBY] human gut metagenome; human gut
5201
5277
+
Arg
ACG
[ENA]
¢þ
>WENV182999415
OLBY01000195
[OLBY] human gut metagenome; human gut
6001
6086
+
Tyr
GTA
[ENA]
¢þ
>WENV182999392
OLBY01000088
[OLBY] human gut metagenome; human gut
6195
6120
-
Val
GAC
[ENA]
¢þ
>WENV182999406
OLBY01000160
[OLBY] human gut metagenome; human gut
6220
6146
-
Glu
TTC
[ENA]
¢þ
>WENV182999397
OLBY01000117
[OLBY] human gut metagenome; human gut
6234
6309
+
Thr
GGT
[ENA]
¢þ
>WENV182999405
OLBY01000160
[OLBY] human gut metagenome; human gut
6388
6312
-
Met
CAT
[ENA]
¢þ
>WENV182999404
OLBY01000159
[OLBY] human gut metagenome; human gut
6585
6510
-
Ala
GGC
[ENA]
¢þ
>WENV182999408
OLBY01000176
[OLBY] human gut metagenome; human gut
6790
6864
+
Glu
CTC
[ENA]
¢þ
>WENV182999409
OLBY01000176
[OLBY] human gut metagenome; human gut
6906
6982
+
Asn
GTT
[ENA]
¢þ
>WENV182999381
OLBY01000046
[OLBY] human gut metagenome; human gut
8043
7972
-
Gln
CTG
[ENA]
¢þ
>WENV182999400
OLBY01000117
[OLBY] human gut metagenome; human gut
8055
7980
-
Thr
GGT
[ENA]
¢þ
>WENV182999399
OLBY01000117
[OLBY] human gut metagenome; human gut
8135
8059
-
Asp
GTC
[ENA]
¢þ
>WENV182999398
OLBY01000117
[OLBY] human gut metagenome; human gut
8495
8420
-
Trp
CCA
[ENA]
¢þ
>WENV182999364
OLBY01000019
[OLBY] human gut metagenome; human gut
8705
8631
-
Ala
GGC
[ENA]
¢þ
>WENV182999372
OLBY01000027
[OLBY] human gut metagenome; human gut
8942
8866
-
Val
TAC
[ENA]
¢þ
>WENV182999401
OLBY01000125
[OLBY] human gut metagenome; human gut
9058
8979
-
Leu
CAA
[ENA]
¢þ
>WENV182999390
OLBY01000074
[OLBY] human gut metagenome; human gut
12160
12085
-
Phe
GAA
[ENA]
¢þ
>WENV182999387
OLBY01000063
[OLBY] human gut metagenome; human gut
16226
16138
-
Ser
GGA
[ENA]
¢þ
>WENV182999385
OLBY01000053
[OLBY] human gut metagenome; human gut
16585
16660
+
Pro
TGG
[ENA]
¢þ
>WENV182999382
OLBY01000047
[OLBY] human gut metagenome; human gut
17300
17373
+
Gly
CCC
[ENA]
¢þ
>WENV182999357
OLBY01000002
[OLBY] human gut metagenome; human gut
17380
17452
+
Arg
CCG
[ENA]
¢þ
>WENV182999361
OLBY01000014
[OLBY] human gut metagenome; human gut
18070
18144
+
Ile2
CAT
[ENA]
¢þ
>WENV182999370
OLBY01000025
[OLBY] human gut metagenome; human gut
18622
18696
+
Glu
TTC
[ENA]
¢þ
>WENV182999386
OLBY01000055
[OLBY] human gut metagenome; human gut
20112
20022
-
Ser
CGA
[ENA]
¢þ
>WENV182999391
OLBY01000077
[OLBY] human gut metagenome; human gut
21219
21293
+
Arg
TCT
[ENA]
¢þ
>WENV182999388
OLBY01000064
[OLBY] human gut metagenome; human gut
21321
21233
-
Ser
GGA
[ENA]
¢þ
>WENV182999389
OLBY01000070
[OLBY] human gut metagenome; human gut
22798
22714
-
Leu
CAA
[ENA]
¢þ
>WENV182999362
OLBY01000016
[OLBY] human gut metagenome; human gut
28733
28805
+
Arg
CCT
[ENA]
¢þ
>WENV182999378
OLBY01000042
[OLBY] human gut metagenome; human gut
33536
33609
+
Gly
GCC
[ENA]
¢þ
>WENV182999376
OLBY01000038
[OLBY] human gut metagenome; human gut
37022
36939
-
Tyr
GTA
[ENA]
¢þ
>WENV182999368
OLBY01000021
[OLBY] human gut metagenome; human gut
39298
39224
-
Thr
TGT
[ENA]
¢þ
>WENV182999373
OLBY01000032
[OLBY] human gut metagenome; human gut
42180
42255
+
Lys
TTT
[ENA]
¢þ
>WENV182999380
OLBY01000046
[OLBY] human gut metagenome; human gut
42868
42943
+
Pro
GGG
[ENA]
¢þ
>WENV182999377
OLBY01000039
[OLBY] human gut metagenome; human gut
43721
43646
-
His
GTG
[ENA]
¢þ
>WENV182999367
OLBY01000021
[OLBY] human gut metagenome; human gut
52405
52479
+
Asn
GTT
[ENA]
¢þ
>WENV182999375
OLBY01000034
[OLBY] human gut metagenome; human gut
54136
54064
-
Glu
TTC
[ENA]
¢þ
>WENV182999374
OLBY01000033
[OLBY] human gut metagenome; human gut
55205
55279
+
Cys
GCA
[ENA]
¢þ
>WENV182999366
OLBY01000020
[OLBY] human gut metagenome; human gut
62183
62110
-
Trp
CCA
[ENA]
¢þ
>WENV182999371
OLBY01000026
[OLBY] human gut metagenome; human gut
63263
63337
+
Asp
GTC
[ENA]
¢þ
>WENV182999363
OLBY01000018
[OLBY] human gut metagenome; human gut
70587
70669
+
Leu
TAG
[ENA]
¢þ
>WENV182999365
OLBY01000020
[OLBY] human gut metagenome; human gut
75805
75890
+
Ser
TGA
[ENA]
¢þ
>WENV182999369
OLBY01000022
[OLBY] human gut metagenome; human gut
78354
78427
+
fMet
CAT
[ENA]
¢þ
>WENV182999360
OLBY01000009
[OLBY] human gut metagenome; human gut
87462
87533
+
Gln
TTG
[ENA]
¢þ
>WENV182999359
OLBY01000006
[OLBY] human gut metagenome; human gut
122105
122032
-
Thr
CGT
[ENA]
¢þ
>WENV182999358
OLBY01000003
[OLBY] human gut metagenome; human gut
142739
142665
-
Met
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
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