This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLCE] human gut metagenome; human gut
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183000429
OLCE01001448
[OLCE] human gut metagenome; human gut
1
77
+
Asp
GTC
[ENA]
¢þ
>WENV183000419
OLCE01000923
[OLCE] human gut metagenome; human gut
6
81
+
Lys
CTT
[ENA]
¢þ
>WENV183000416
OLCE01000626
[OLCE] human gut metagenome; human gut
25
97
+
Arg
CCG
[ENA]
¢þ
>WENV183000455
OLCE01004295
[OLCE] human gut metagenome; human gut
60
134
+
Val
CAC
[ENA]
¢þ
>WENV183000420
OLCE01000923
[OLCE] human gut metagenome; human gut
84
158
+
Glu
CTC
[ENA]
¢þ
>WENV183000438
OLCE01002126
[OLCE] human gut metagenome; human gut
85
10
-
Arg
TCT
[ENA]
¢þ
>WENV183000381
OLCE01000084
[OLCE] human gut metagenome; human gut
105
20
-
Ser
TGA
[ENA]
¢þ
>WENV183000461
OLCE01005138
[OLCE] human gut metagenome; human gut
116
191
+
Ala
CGC
[ENA]
¢þ
>WENV183000459
OLCE01004418
[OLCE] human gut metagenome; human gut
131
205
+
Glu
CTC
[ENA]
¢þ
>WENV183000451
OLCE01003622
[OLCE] human gut metagenome; human gut
140
52
-
Leu
TAA
[ENA]
¢þ
>WENV183000444
OLCE01002629
[OLCE] human gut metagenome; human gut
151
225
+
Arg
CCG
[ENA]
¢þ
>WENV183000410
OLCE01000380
[OLCE] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¢þ
>WENV183000435
OLCE01001629
[OLCE] human gut metagenome; human gut
160
84
-
Ile
GAT
[ENA]
¢þ
>WENV183000430
OLCE01001448
[OLCE] human gut metagenome; human gut
163
238
+
Gly
GCC
[ENA]
¢þ
>WENV183000437
OLCE01002126
[OLCE] human gut metagenome; human gut
168
95
-
Gly
TCC
[ENA]
¢þ
>WENV183000446
OLCE01003045
[OLCE] human gut metagenome; human gut
223
310
+
Ser
TGA
[ENA]
¢þ
>WENV183000456
OLCE01004358
[OLCE] human gut metagenome; human gut
234
310
+
Met
CAT
[ENA]
¢þ
>WENV183000447
OLCE01003344
[OLCE] human gut metagenome; human gut
234
317
+
Leu
TAA
[ENA]
¢þ
>WENV183000460
OLCE01004418
[OLCE] human gut metagenome; human gut
246
320
+
Asn
GTT
[ENA]
¢þ
>WENV183000440
OLCE01002285
[OLCE] human gut metagenome; human gut
290
214
-
Arg
CCG
[ENA]
¢þ
>WENV183000445
OLCE01002791
[OLCE] human gut metagenome; human gut
292
220
-
Gly
GCC
[ENA]
¢þ
>WENV183000431
OLCE01001628
[OLCE] human gut metagenome; human gut
317
389
+
Gln
CTG
[ENA]
¢þ
>WENV183000453
OLCE01003874
[OLCE] human gut metagenome; human gut
319
392
+
Val
GAC
[ENA]
¢þ
>WENV183000448
OLCE01003400
[OLCE] human gut metagenome; human gut
334
416
+
Leu
TAG
[ENA]
¢þ
>WENV183000458
OLCE01004375
[OLCE] human gut metagenome; human gut
344
269
-
Gly
GCC
[ENA]
¢þ
>WENV183000427
OLCE01001138
[OLCE] human gut metagenome; human gut
345
421
+
fMet
CAT
[ENA]
¢þ
>WENV183000450
OLCE01003622
[OLCE] human gut metagenome; human gut
346
270
-
Pro
TGG
[ENA]
¢þ
>WENV183000417
OLCE01000907
[OLCE] human gut metagenome; human gut
350
435
+
Ser
TGA
[ENA]
¢þ
>WENV183000462
OLCE01005166
[OLCE] human gut metagenome; human gut
371
446
+
Phe
GAA
[ENA]
¢þ
>WENV183000415
OLCE01000610
[OLCE] human gut metagenome; human gut
374
450
+
Ile
GAT
[ENA]
¢þ
>WENV183000441
OLCE01002308
[OLCE] human gut metagenome; human gut
375
450
+
Pro
TGG
[ENA]
¢þ
>WENV183000449
OLCE01003412
[OLCE] human gut metagenome; human gut
378
303
-
Gly
CCC
[ENA]
¢þ
>WENV183000454
OLCE01003929
[OLCE] human gut metagenome; human gut
382
464
+
Leu
TAG
[ENA]
¢þ
>WENV183000457
OLCE01004358
[OLCE] human gut metagenome; human gut
402
473
+
Glu
TTC
[ENA]
¢þ
>WENV183000442
OLCE01002576
[OLCE] human gut metagenome; human gut
403
478
+
Pro
TGG
[ENA]
¢þ
>WENV183000452
OLCE01003812
[OLCE] human gut metagenome; human gut
435
361
-
Ala
TGC
[ENA]
¢þ
>WENV183000421
OLCE01000923
[OLCE] human gut metagenome; human gut
437
511
+
Asn
GTT
[ENA]
¢þ
>WENV183000432
OLCE01001628
[OLCE] human gut metagenome; human gut
442
517
+
Pro
CGG
[ENA]
¢þ
>WENV183000439
OLCE01002128
[OLCE] human gut metagenome; human gut
449
374
-
Pro
TGG
[ENA]
¢þ
>WENV183000418
OLCE01000907
[OLCE] human gut metagenome; human gut
494
585
+
Ser
GGA
[ENA]
¢þ
>WENV183000443
OLCE01002576
[OLCE] human gut metagenome; human gut
497
567
+
Gly
TCC
[ENA]
¢þ
>WENV183000422
OLCE01000923
[OLCE] human gut metagenome; human gut
515
588
+
Glu
TTC
[ENA]
¢þ
>WENV183000433
OLCE01001628
[OLCE] human gut metagenome; human gut
530
603
+
Glu
CTC
[ENA]
¢þ
>WENV183000423
OLCE01000923
[OLCE] human gut metagenome; human gut
622
694
+
Thr
TGT
[ENA]
¢þ
>WENV183000434
OLCE01001628
[OLCE] human gut metagenome; human gut
646
718
+
Thr
CGT
[ENA]
¢þ
>WENV183000404
OLCE01000196
[OLCE] human gut metagenome; human gut
649
736
+
Ser
GCT
[ENA]
¢þ
>WENV183000436
OLCE01001763
[OLCE] human gut metagenome; human gut
656
577
-
Leu
CAA
[ENA]
¢þ
>WENV183000424
OLCE01000923
[OLCE] human gut metagenome; human gut
725
799
+
Ile2
CAT
[ENA]
¢þ
>WENV183000390
OLCE01000104
[OLCE] human gut metagenome; human gut
735
820
+
Ser
GCT
[ENA]
¢þ
>WENV183000428
OLCE01001176
[OLCE] human gut metagenome; human gut
806
891
+
Tyr
GTA
[ENA]
¢þ
>WENV183000425
OLCE01000923
[OLCE] human gut metagenome; human gut
818
891
+
Asp
GTC
[ENA]
¢þ
>WENV183000391
OLCE01000104
[OLCE] human gut metagenome; human gut
826
901
+
Arg
ACG
[ENA]
¢þ
>WENV183000412
OLCE01000549
[OLCE] human gut metagenome; human gut
877
953
+
fMet
CAT
[ENA]
¢þ
>WENV183000392
OLCE01000104
[OLCE] human gut metagenome; human gut
908
994
+
Ser
TGA
[ENA]
¢þ
>WENV183000426
OLCE01000923
[OLCE] human gut metagenome; human gut
919
1006
+
Leu
TAA
[ENA]
¢þ
>WENV183000393
OLCE01000104
[OLCE] human gut metagenome; human gut
1000
1071
+
Gln
CTG
[ENA]
¢þ
>WENV183000394
OLCE01000104
[OLCE] human gut metagenome; human gut
1080
1153
+
Phe
GAA
[ENA]
¢þ
>WENV183000405
OLCE01000196
[OLCE] human gut metagenome; human gut
1091
1165
+
Glu
CTC
[ENA]
¢þ
>WENV183000414
OLCE01000609
[OLCE] human gut metagenome; human gut
1147
1222
+
Trp
CCA
[ENA]
¢þ
>WENV183000395
OLCE01000104
[OLCE] human gut metagenome; human gut
1271
1342
+
Gln
TTG
[ENA]
¢þ
>WENV183000413
OLCE01000595
[OLCE] human gut metagenome; human gut
1316
1400
+
Leu
CAA
[ENA]
¢þ
>WENV183000396
OLCE01000104
[OLCE] human gut metagenome; human gut
1355
1426
+
Arg
TCG
[ENA]
¢þ
>WENV183000397
OLCE01000104
[OLCE] human gut metagenome; human gut
1432
1505
+
His
GTG
[ENA]
¢þ
>WENV183000398
OLCE01000104
[OLCE] human gut metagenome; human gut
1510
1584
+
Thr
TGT
[ENA]
¢þ
>WENV183000399
OLCE01000113
[OLCE] human gut metagenome; human gut
1725
1799
+
Asp
GTC
[ENA]
¢þ
>WENV183000411
OLCE01000476
[OLCE] human gut metagenome; human gut
1948
1867
-
Leu
TAG
[ENA]
¢þ
>WENV183000409
OLCE01000353
[OLCE] human gut metagenome; human gut
3019
2943
-
Pro
CGG
[ENA]
¢þ
>WENV183000369
OLCE01000051
[OLCE] human gut metagenome; human gut
3450
3365
-
Ser
TGA
[ENA]
¢þ
>WENV183000406
OLCE01000204
[OLCE] human gut metagenome; human gut
3770
3858
+
Ser
GGA
[ENA]
¢þ
>WENV183000371
OLCE01000063
[OLCE] human gut metagenome; human gut
3834
3760
-
Arg
TCT
[ENA]
¢þ
>WENV183000364
OLCE01000044
[OLCE] human gut metagenome; human gut
4017
4090
+
Lys
CTT
[ENA]
¢þ
>WENV183000365
OLCE01000044
[OLCE] human gut metagenome; human gut
4114
4187
+
Lys
CTT
[ENA]
¢þ
>WENV183000366
OLCE01000044
[OLCE] human gut metagenome; human gut
4207
4280
+
Lys
CTT
[ENA]
¢þ
>WENV183000408
OLCE01000299
[OLCE] human gut metagenome; human gut
4441
4515
+
Cys
GCA
[ENA]
¢þ
>WENV183000360
OLCE01000028
[OLCE] human gut metagenome; human gut
4474
4400
-
Ala
GGC
[ENA]
¢þ
>WENV183000385
OLCE01000094
[OLCE] human gut metagenome; human gut
5118
5044
-
Thr
TGT
[ENA]
¢þ
>WENV183000372
OLCE01000069
[OLCE] human gut metagenome; human gut
5154
5227
+
fMet
CAT
[ENA]
¢þ
>WENV183000355
OLCE01000004
[OLCE] human gut metagenome; human gut
5234
5160
-
Thr
TGT
[ENA]
¢þ
>WENV183000373
OLCE01000069
[OLCE] human gut metagenome; human gut
5445
5518
+
Asn
GTT
[ENA]
¢þ
>WENV183000407
OLCE01000266
[OLCE] human gut metagenome; human gut
5454
5529
+
His
GTG
[ENA]
¢þ
>WENV183000374
OLCE01000069
[OLCE] human gut metagenome; human gut
5525
5598
+
Trp
CCA
[ENA]
¢þ
>WENV183000375
OLCE01000069
[OLCE] human gut metagenome; human gut
5603
5674
+
Gln
TTG
[ENA]
¢þ
>WENV183000376
OLCE01000069
[OLCE] human gut metagenome; human gut
5679
5751
+
Glu
TTC
[ENA]
¢þ
>WENV183000377
OLCE01000069
[OLCE] human gut metagenome; human gut
5915
5997
+
Tyr
GTA
[ENA]
¢þ
>WENV183000384
OLCE01000093
[OLCE] human gut metagenome; human gut
6137
6064
-
Gly
GCC
[ENA]
¢þ
>WENV183000383
OLCE01000093
[OLCE] human gut metagenome; human gut
6233
6150
-
Leu
CAG
[ENA]
¢þ
>WENV183000382
OLCE01000093
[OLCE] human gut metagenome; human gut
6353
6280
-
Gly
GCC
[ENA]
¢þ
>WENV183000362
OLCE01000038
[OLCE] human gut metagenome; human gut
8233
8157
-
Val
TAC
[ENA]
¢þ
>WENV183000361
OLCE01000038
[OLCE] human gut metagenome; human gut
8346
8271
-
Val
TAC
[ENA]
¢þ
>WENV183000400
OLCE01000143
[OLCE] human gut metagenome; human gut
10879
10953
+
Asp
GTC
[ENA]
¢þ
>WENV183000402
OLCE01000162
[OLCE] human gut metagenome; human gut
10944
11018
+
Met
CAT
[ENA]
¢þ
>WENV183000401
OLCE01000143
[OLCE] human gut metagenome; human gut
10982
11056
+
Asp
GTC
[ENA]
¢þ
>WENV183000403
OLCE01000162
[OLCE] human gut metagenome; human gut
11079
11153
+
Met
CAT
[ENA]
¢þ
>WENV183000389
OLCE01000102
[OLCE] human gut metagenome; human gut
12996
13071
+
Gly
CCC
[ENA]
¢þ
>WENV183000380
OLCE01000084
[OLCE] human gut metagenome; human gut
13726
13799
+
Trp
CCA
[ENA]
¢þ
>WENV183000358
OLCE01000011
[OLCE] human gut metagenome; human gut
13991
13916
-
Pro
GGG
[ENA]
¢þ
>WENV183000388
OLCE01000098
[OLCE] human gut metagenome; human gut
15343
15270
-
Trp
CCA
[ENA]
¢þ
>WENV183000356
OLCE01000010
[OLCE] human gut metagenome; human gut
16420
16491
+
Gln
TTG
[ENA]
¢þ
>WENV183000387
OLCE01000098
[OLCE] human gut metagenome; human gut
16708
16636
-
Thr
GGT
[ENA]
¢þ
>WENV183000386
OLCE01000095
[OLCE] human gut metagenome; human gut
16881
16956
+
Lys
TTT
[ENA]
¢þ
>WENV183000370
OLCE01000059
[OLCE] human gut metagenome; human gut
18188
18114
-
Ile2
CAT
[ENA]
¢þ
>WENV183000378
OLCE01000072
[OLCE] human gut metagenome; human gut
19992
20065
+
Gly
GCC
[ENA]
¢þ
>WENV183000379
OLCE01000072
[OLCE] human gut metagenome; human gut
20081
20166
+
Leu
TAA
[ENA]
¢þ
>WENV183000368
OLCE01000051
[OLCE] human gut metagenome; human gut
23584
23658
+
Glu
TTC
[ENA]
¢þ
>WENV183000367
OLCE01000047
[OLCE] human gut metagenome; human gut
24105
24187
+
Leu
TAG
[ENA]
¢þ
>WENV183000363
OLCE01000041
[OLCE] human gut metagenome; human gut
25140
25067
-
Thr
CGT
[ENA]
¢þ
>WENV183000354
OLCE01000002
[OLCE] human gut metagenome; human gut
28450
28522
+
Arg
CCT
[ENA]
¢þ
>WENV183000359
OLCE01000013
[OLCE] human gut metagenome; human gut
35815
35903
+
Ser
GGA
[ENA]
¢þ
>WENV183000357
OLCE01000011
[OLCE] human gut metagenome; human gut
42143
42214
+
Gln
CTG
[ENA]
¢þ
>WENV183000353
OLCE01000001
[OLCE] human gut metagenome; human gut
92436
92363
-
Pro
CGG
[ENA]
¢þ
>WENV183000352
OLCE01000001
[OLCE] human gut metagenome; human gut
92617
92692
+
Phe
GAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK