This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLJE] human gut metagenome; human gut
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183083886
OLJE01000378
[OLJE] human gut metagenome; human gut
64
139
+
Asn
GTT
[ENA]
¢þ
>WENV183083918
OLJE01002424
[OLJE] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV183083803
OLJE01000011
[OLJE] human gut metagenome; human gut
98
172
+
Gln
CTG
[ENA]
¢þ
>WENV183083870
OLJE01000239
[OLJE] human gut metagenome; human gut
108
183
+
Trp
CCA
[ENA]
¢þ
>WENV183083919
OLJE01002424
[OLJE] human gut metagenome; human gut
143
217
+
Lys
TTT
[ENA]
¢þ
>WENV183083802
OLJE01000010
[OLJE] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV183083912
OLJE01000801
[OLJE] human gut metagenome; human gut
172
97
-
Ala
GGC
[ENA]
¢þ
>WENV183083804
OLJE01000011
[OLJE] human gut metagenome; human gut
209
283
+
Gln
CTG
[ENA]
¢þ
>WENV183083920
OLJE01002424
[OLJE] human gut metagenome; human gut
223
306
+
Leu
TAG
[ENA]
¢þ
>WENV183083921
OLJE01002424
[OLJE] human gut metagenome; human gut
322
397
+
Thr
TGT
[ENA]
¢þ
>WENV183083922
OLJE01002424
[OLJE] human gut metagenome; human gut
407
478
+
Gly
GCC
[ENA]
¢þ
>WENV183083924
OLJE01002728
[OLJE] human gut metagenome; human gut
476
401
-
Ala
TGC
[ENA]
¢þ
>WENV183083923
OLJE01002424
[OLJE] human gut metagenome; human gut
495
580
+
Leu
TAA
[ENA]
¢þ
>WENV183083899
OLJE01000611
[OLJE] human gut metagenome; human gut
616
529
-
Ser
TGA
[ENA]
¢þ
>WENV183083917
OLJE01001729
[OLJE] human gut metagenome; human gut
694
619
-
Ala
TGC
[ENA]
¢þ
>WENV183083881
OLJE01000290
[OLJE] human gut metagenome; human gut
840
765
-
Thr
CGT
[ENA]
¢þ
>WENV183083916
OLJE01001729
[OLJE] human gut metagenome; human gut
876
800
-
Ile
GAT
[ENA]
¢þ
>WENV183083915
OLJE01001692
[OLJE] human gut metagenome; human gut
908
980
+
Thr
CGT
[ENA]
¢þ
>WENV183083882
OLJE01000292
[OLJE] human gut metagenome; human gut
1121
1045
-
Pro
GGG
[ENA]
¢þ
>WENV183083913
OLJE01000835
[OLJE] human gut metagenome; human gut
1415
1342
-
Gly
CCC
[ENA]
¢þ
>WENV183083914
OLJE01001097
[OLJE] human gut metagenome; human gut
1563
1489
-
Lys
CTT
[ENA]
¢þ
>WENV183083887
OLJE01000394
[OLJE] human gut metagenome; human gut
1689
1613
-
Asp
GTC
[ENA]
¢þ
>WENV183083833
OLJE01000104
[OLJE] human gut metagenome; human gut
1712
1637
-
Phe
GAA
[ENA]
¢þ
>WENV183083904
OLJE01000713
[OLJE] human gut metagenome; human gut
2074
2160
+
Leu
GAG
[ENA]
¢þ
>WENV183083840
OLJE01000127
[OLJE] human gut metagenome; human gut
2350
2274
-
Arg
TCT
[ENA]
¢þ
>WENV183083865
OLJE01000193
[OLJE] human gut metagenome; human gut
2507
2432
-
Ile2
CAT
[ENA]
¢þ
>WENV183083839
OLJE01000127
[OLJE] human gut metagenome; human gut
2529
2456
-
Gly
TCC
[ENA]
¢þ
>WENV183083903
OLJE01000661
[OLJE] human gut metagenome; human gut
2532
2457
-
Ile2
CAT
[ENA]
¢þ
>WENV183083838
OLJE01000127
[OLJE] human gut metagenome; human gut
2616
2540
-
Pro
TGG
[ENA]
¢þ
>WENV183083909
OLJE01000764
[OLJE] human gut metagenome; human gut
2712
2797
+
Leu
CAG
[ENA]
¢þ
>WENV183083911
OLJE01000800
[OLJE] human gut metagenome; human gut
2802
2714
-
Leu
TAA
[ENA]
¢þ
>WENV183083910
OLJE01000800
[OLJE] human gut metagenome; human gut
2891
2817
-
Cys
GCA
[ENA]
¢þ
>WENV183083849
OLJE01000136
[OLJE] human gut metagenome; human gut
3202
3127
-
Val
TAC
[ENA]
¢þ
>WENV183083896
OLJE01000548
[OLJE] human gut metagenome; human gut
3230
3302
+
Gln
CTG
[ENA]
¢þ
>WENV183083848
OLJE01000136
[OLJE] human gut metagenome; human gut
3282
3208
-
Glu
TTC
[ENA]
¢þ
>WENV183083832
OLJE01000103
[OLJE] human gut metagenome; human gut
3306
3218
-
Ser
TGA
[ENA]
¢þ
>WENV183083847
OLJE01000136
[OLJE] human gut metagenome; human gut
3366
3291
-
Asn
GTT
[ENA]
¢þ
>WENV183083898
OLJE01000605
[OLJE] human gut metagenome; human gut
3416
3322
-
SeC
TCA
[ENA]
¢þ
>WENV183083846
OLJE01000136
[OLJE] human gut metagenome; human gut
3448
3374
-
Gly
GCC
[ENA]
¢þ
>WENV183083908
OLJE01000741
[OLJE] human gut metagenome; human gut
3482
3397
-
Leu
GAG
[ENA]
¢þ
>WENV183083905
OLJE01000718
[OLJE] human gut metagenome; human gut
3513
3588
+
Thr
TGT
[ENA]
¢þ
>WENV183083845
OLJE01000136
[OLJE] human gut metagenome; human gut
3527
3452
-
Val
TAC
[ENA]
¢þ
>WENV183083906
OLJE01000718
[OLJE] human gut metagenome; human gut
3597
3681
+
Tyr
GTA
[ENA]
¢þ
>WENV183083844
OLJE01000136
[OLJE] human gut metagenome; human gut
3607
3533
-
Glu
TTC
[ENA]
¢þ
>WENV183083843
OLJE01000136
[OLJE] human gut metagenome; human gut
3688
3613
-
Lys
TTT
[ENA]
¢þ
>WENV183083819
OLJE01000037
[OLJE] human gut metagenome; human gut
3716
3792
+
Pro
GGG
[ENA]
¢þ
>WENV183083842
OLJE01000136
[OLJE] human gut metagenome; human gut
3767
3692
-
Asn
GTT
[ENA]
¢þ
>WENV183083907
OLJE01000718
[OLJE] human gut metagenome; human gut
3796
3870
+
Gly
TCC
[ENA]
¢þ
>WENV183083841
OLJE01000136
[OLJE] human gut metagenome; human gut
3849
3775
-
Gly
GCC
[ENA]
¢þ
>WENV183083900
OLJE01000628
[OLJE] human gut metagenome; human gut
4181
4254
+
Gly
CCC
[ENA]
¢þ
>WENV183083901
OLJE01000636
[OLJE] human gut metagenome; human gut
4964
5039
+
His
GTG
[ENA]
¢þ
>WENV183083885
OLJE01000309
[OLJE] human gut metagenome; human gut
5035
4949
-
Leu
TAA
[ENA]
¢þ
>WENV183083902
OLJE01000636
[OLJE] human gut metagenome; human gut
5064
5138
+
Gln
TTG
[ENA]
¢þ
>WENV183083884
OLJE01000309
[OLJE] human gut metagenome; human gut
5122
5049
-
Cys
GCA
[ENA]
¢þ
>WENV183083883
OLJE01000309
[OLJE] human gut metagenome; human gut
5236
5161
-
Gly
GCC
[ENA]
¢þ
>WENV183083855
OLJE01000159
[OLJE] human gut metagenome; human gut
5280
5205
-
Asn
GTT
[ENA]
¢þ
>WENV183083897
OLJE01000570
[OLJE] human gut metagenome; human gut
5566
5490
-
Pro
CGG
[ENA]
¢þ
>WENV183083869
OLJE01000232
[OLJE] human gut metagenome; human gut
6127
6202
+
Thr
CGT
[ENA]
¢þ
>WENV183083895
OLJE01000537
[OLJE] human gut metagenome; human gut
6234
6309
+
Asn
GTT
[ENA]
¢þ
>WENV183083831
OLJE01000091
[OLJE] human gut metagenome; human gut
6414
6490
+
Arg
CCT
[ENA]
¢þ
>WENV183083852
OLJE01000159
[OLJE] human gut metagenome; human gut
7056
7131
+
Asn
GTT
[ENA]
¢þ
>WENV183083894
OLJE01000520
[OLJE] human gut metagenome; human gut
7098
7023
-
Lys
TTT
[ENA]
¢þ
>WENV183083893
OLJE01000520
[OLJE] human gut metagenome; human gut
7178
7103
-
Val
TAC
[ENA]
¢þ
>WENV183083892
OLJE01000520
[OLJE] human gut metagenome; human gut
7302
7227
-
Val
TAC
[ENA]
¢þ
>WENV183083830
OLJE01000081
[OLJE] human gut metagenome; human gut
7479
7552
+
Arg
CCG
[ENA]
¢þ
>WENV183083891
OLJE01000484
[OLJE] human gut metagenome; human gut
7986
7912
-
Gln
CTG
[ENA]
¢þ
>WENV183083880
OLJE01000283
[OLJE] human gut metagenome; human gut
8025
8100
+
Phe
GAA
[ENA]
¢þ
>WENV183083890
OLJE01000484
[OLJE] human gut metagenome; human gut
8155
8081
-
Gln
CTG
[ENA]
¢þ
>WENV183083857
OLJE01000173
[OLJE] human gut metagenome; human gut
8477
8567
+
Ser
GGA
[ENA]
¢þ
>WENV183083889
OLJE01000460
[OLJE] human gut metagenome; human gut
8778
8706
-
Thr
GGT
[ENA]
¢þ
>WENV183083817
OLJE01000034
[OLJE] human gut metagenome; human gut
9364
9439
+
Lys
CTT
[ENA]
¢þ
>WENV183083888
OLJE01000432
[OLJE] human gut metagenome; human gut
9889
9803
-
Leu
CAA
[ENA]
¢þ
>WENV183083822
OLJE01000052
[OLJE] human gut metagenome; human gut
9969
9897
-
Lys
CTT
[ENA]
¢þ
>WENV183083826
OLJE01000067
[OLJE] human gut metagenome; human gut
10346
10262
-
Leu
CAA
[ENA]
¢þ
>WENV183083868
OLJE01000226
[OLJE] human gut metagenome; human gut
11634
11718
+
Leu
CAA
[ENA]
¢þ
>WENV183083814
OLJE01000027
[OLJE] human gut metagenome; human gut
12985
12910
-
Ile2
CAT
[ENA]
¢þ
>WENV183083851
OLJE01000141
[OLJE] human gut metagenome; human gut
13871
13954
+
Leu
CAA
[ENA]
¢þ
>WENV183083879
OLJE01000267
[OLJE] human gut metagenome; human gut
14034
13958
-
Pro
TGG
[ENA]
¢þ
>WENV183083878
OLJE01000267
[OLJE] human gut metagenome; human gut
14166
14080
-
Leu
CAG
[ENA]
¢þ
>WENV183083864
OLJE01000181
[OLJE] human gut metagenome; human gut
14249
14165
-
Leu
TAG
[ENA]
¢þ
>WENV183083877
OLJE01000267
[OLJE] human gut metagenome; human gut
14264
14189
-
His
GTG
[ENA]
¢þ
>WENV183083876
OLJE01000267
[OLJE] human gut metagenome; human gut
14396
14320
-
Arg
CCG
[ENA]
¢þ
>WENV183083871
OLJE01000252
[OLJE] human gut metagenome; human gut
17052
17127
+
Thr
TGT
[ENA]
¢þ
>WENV183083872
OLJE01000252
[OLJE] human gut metagenome; human gut
17138
17222
+
Tyr
GTA
[ENA]
¢þ
>WENV183083873
OLJE01000252
[OLJE] human gut metagenome; human gut
17228
17303
+
fMet
CAT
[ENA]
¢þ
>WENV183083874
OLJE01000252
[OLJE] human gut metagenome; human gut
17335
17410
+
Thr
GGT
[ENA]
¢þ
>WENV183083875
OLJE01000252
[OLJE] human gut metagenome; human gut
17416
17492
+
Met
CAT
[ENA]
¢þ
>WENV183083867
OLJE01000220
[OLJE] human gut metagenome; human gut
17858
17944
+
Leu
GAG
[ENA]
¢þ
>WENV183083850
OLJE01000137
[OLJE] human gut metagenome; human gut
19630
19555
-
Phe
GAA
[ENA]
¢þ
>WENV183083824
OLJE01000058
[OLJE] human gut metagenome; human gut
19890
19984
+
SeC
TCA
[ENA]
¢þ
>WENV183083816
OLJE01000031
[OLJE] human gut metagenome; human gut
20000
19926
-
Asn
GTT
[ENA]
¢þ
>WENV183083866
OLJE01000202
[OLJE] human gut metagenome; human gut
20729
20653
-
Arg
TCT
[ENA]
¢þ
>WENV183083834
OLJE01000107
[OLJE] human gut metagenome; human gut
20936
21016
+
Tyr
GTA
[ENA]
¢þ
>WENV183083835
OLJE01000107
[OLJE] human gut metagenome; human gut
21022
21095
+
Gln
TTG
[ENA]
¢þ
>WENV183083863
OLJE01000181
[OLJE] human gut metagenome; human gut
22567
22491
-
Arg
ACG
[ENA]
¢þ
>WENV183083862
OLJE01000181
[OLJE] human gut metagenome; human gut
22755
22680
-
Trp
CCA
[ENA]
¢þ
>WENV183083828
OLJE01000073
[OLJE] human gut metagenome; human gut
22785
22698
-
Ser
CGA
[ENA]
¢þ
>WENV183083861
OLJE01000180
[OLJE] human gut metagenome; human gut
23000
22927
-
Glu
TTC
[ENA]
¢þ
>WENV183083860
OLJE01000180
[OLJE] human gut metagenome; human gut
23085
23010
-
Ile
GAT
[ENA]
¢þ
>WENV183083859
OLJE01000180
[OLJE] human gut metagenome; human gut
23168
23098
-
Gly
TCC
[ENA]
¢þ
>WENV183083858
OLJE01000180
[OLJE] human gut metagenome; human gut
23246
23172
-
Phe
GAA
[ENA]
¢þ
>WENV183083837
OLJE01000127
[OLJE] human gut metagenome; human gut
23748
23838
+
Ser
CGA
[ENA]
¢þ
>WENV183083813
OLJE01000024
[OLJE] human gut metagenome; human gut
24884
24800
-
Tyr
GTA
[ENA]
¢þ
>WENV183083812
OLJE01000024
[OLJE] human gut metagenome; human gut
25106
25022
-
Tyr
GTA
[ENA]
¢þ
>WENV183083854
OLJE01000159
[OLJE] human gut metagenome; human gut
25219
25144
-
Asn
GTT
[ENA]
¢þ
>WENV183083856
OLJE01000164
[OLJE] human gut metagenome; human gut
25775
25850
+
Asp
GTC
[ENA]
¢þ
>WENV183083853
OLJE01000159
[OLJE] human gut metagenome; human gut
26211
26300
+
Ser
CGA
[ENA]
¢þ
>WENV183083836
OLJE01000125
[OLJE] human gut metagenome; human gut
28902
28974
+
Thr
CGT
[ENA]
¢þ
>WENV183083805
OLJE01000012
[OLJE] human gut metagenome; human gut
31997
32083
+
Leu
CAG
[ENA]
¢þ
>WENV183083806
OLJE01000012
[OLJE] human gut metagenome; human gut
32112
32197
+
Leu
CAG
[ENA]
¢þ
>WENV183083807
OLJE01000012
[OLJE] human gut metagenome; human gut
32230
32315
+
Leu
CAG
[ENA]
¢þ
>WENV183083827
OLJE01000072
[OLJE] human gut metagenome; human gut
33234
33308
+
Arg
CCG
[ENA]
¢þ
>WENV183083829
OLJE01000080
[OLJE] human gut metagenome; human gut
35216
35290
+
Ile2
CAT
[ENA]
¢þ
>WENV183083815
OLJE01000028
[OLJE] human gut metagenome; human gut
35977
36064
+
Ser
TGA
[ENA]
¢þ
>WENV183083818
OLJE01000035
[OLJE] human gut metagenome; human gut
36570
36657
+
Ser
GGA
[ENA]
¢þ
>WENV183083820
OLJE01000041
[OLJE] human gut metagenome; human gut
38705
38631
-
Arg
TCT
[ENA]
¢þ
>WENV183083825
OLJE01000061
[OLJE] human gut metagenome; human gut
51725
51635
-
Ser
GCT
[ENA]
¢þ
>WENV183083821
OLJE01000051
[OLJE] human gut metagenome; human gut
52245
52319
+
Arg
CCT
[ENA]
¢þ
>WENV183083823
OLJE01000056
[OLJE] human gut metagenome; human gut
53409
53479
+
Gly
CCC
[ENA]
¢þ
>WENV183083811
OLJE01000019
[OLJE] human gut metagenome; human gut
64369
64294
-
Asn
GTT
[ENA]
¢þ
>WENV183083801
OLJE01000006
[OLJE] human gut metagenome; human gut
65099
65172
+
Gly
CCC
[ENA]
¢þ
>WENV183083809
OLJE01000019
[OLJE] human gut metagenome; human gut
66117
66192
+
Asn
GTT
[ENA]
¢þ
>WENV183083810
OLJE01000019
[OLJE] human gut metagenome; human gut
68629
68704
+
Asn
GTT
[ENA]
¢þ
>WENV183083808
OLJE01000013
[OLJE] human gut metagenome; human gut
91772
91856
+
Leu
GAG
[ENA]
¢þ
>WENV183083800
OLJE01000003
[OLJE] human gut metagenome; human gut
113190
113115
-
Arg
CCT
[ENA]
¢þ
>WENV183083798
OLJE01000002
[OLJE] human gut metagenome; human gut
147407
147483
+
Val
GAC
[ENA]
¢þ
>WENV183083799
OLJE01000002
[OLJE] human gut metagenome; human gut
147488
147564
+
Val
GAC
[ENA]
¢þ
>WENV183083797
OLJE01000001
[OLJE] human gut metagenome; human gut
264698
264774
+
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK