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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OLJN] human gut metagenome; human gut
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183087680
OLJN01001020
[OLJN] human gut metagenome; human gut
199
112
-
Ser
GGA
[ENA]
¢þ
>WENV183087681
OLJN01001382
[OLJN] human gut metagenome; human gut
307
379
+
Thr
CGT
[ENA]
¢þ
>WENV183087679
OLJN01001017
[OLJN] human gut metagenome; human gut
420
348
-
Arg
CCT
[ENA]
¢þ
>WENV183087678
OLJN01000118
[OLJN] human gut metagenome; human gut
438
352
-
Leu
CAG
[ENA]
¢þ
>WENV183087677
OLJN01000118
[OLJN] human gut metagenome; human gut
536
461
-
His
GTG
[ENA]
¢þ
>WENV183087676
OLJN01000118
[OLJN] human gut metagenome; human gut
668
592
-
Arg
CCG
[ENA]
¢þ
>WENV183087672
OLJN01000018
[OLJN] human gut metagenome; human gut
1351
1276
-
Thr
GGT
[ENA]
¢þ
>WENV183087673
OLJN01000066
[OLJN] human gut metagenome; human gut
2157
2232
+
Val
TAC
[ENA]
¢þ
>WENV183087674
OLJN01000066
[OLJN] human gut metagenome; human gut
2236
2310
+
Gly
GCC
[ENA]
¢þ
>WENV183087675
OLJN01000066
[OLJN] human gut metagenome; human gut
2316
2391
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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