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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OLJO] human gut metagenome; human gut
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183087806
OLJO01002195
[OLJO] human gut metagenome; human gut
52
128
+
Pro
CGG
[ENA]
¢þ
>WENV183087745
OLJO01000106
[OLJO] human gut metagenome; human gut
70
150
+
Tyr
GTA
[ENA]
¢þ
>WENV183087683
OLJO01000005
[OLJO] human gut metagenome; human gut
91
164
+
Arg
ACG
[ENA]
¢þ
>WENV183087804
OLJO01002000
[OLJO] human gut metagenome; human gut
126
199
+
Lys
TTT
[ENA]
¢þ
>WENV183087807
OLJO01002460
[OLJO] human gut metagenome; human gut
131
204
+
Glu
CTC
[ENA]
¢þ
>WENV183087830
OLJO01002980
[OLJO] human gut metagenome; human gut
143
68
-
Lys
CTT
[ENA]
¢þ
>WENV183087746
OLJO01000106
[OLJO] human gut metagenome; human gut
156
228
+
Trp
CCA
[ENA]
¢þ
>WENV183087684
OLJO01000005
[OLJO] human gut metagenome; human gut
183
258
+
Pro
TGG
[ENA]
¢þ
>WENV183087808
OLJO01002516
[OLJO] human gut metagenome; human gut
186
260
+
Val
TAC
[ENA]
¢þ
>WENV183087818
OLJO01002710
[OLJO] human gut metagenome; human gut
208
282
+
Ile2
CAT
[ENA]
¢þ
>WENV183087829
OLJO01002980
[OLJO] human gut metagenome; human gut
227
151
-
Arg
TCT
[ENA]
¢þ
>WENV183087747
OLJO01000106
[OLJO] human gut metagenome; human gut
239
313
+
His
GTG
[ENA]
¢þ
>WENV183087809
OLJO01002516
[OLJO] human gut metagenome; human gut
262
334
+
Asp
GTC
[ENA]
¢þ
>WENV183087685
OLJO01000005
[OLJO] human gut metagenome; human gut
263
338
+
Met
CAT
[ENA]
¢þ
>WENV183087828
OLJO01002980
[OLJO] human gut metagenome; human gut
307
234
-
Gly
TCC
[ENA]
¢þ
>WENV183087748
OLJO01000106
[OLJO] human gut metagenome; human gut
331
404
+
Gln
TTG
[ENA]
¢þ
>WENV183087686
OLJO01000005
[OLJO] human gut metagenome; human gut
353
428
+
Ile2
CAT
[ENA]
¢þ
>WENV183087810
OLJO01002516
[OLJO] human gut metagenome; human gut
359
431
+
Lys
TTT
[ENA]
¢þ
>WENV183087827
OLJO01002980
[OLJO] human gut metagenome; human gut
387
313
-
Gly
GCC
[ENA]
¢þ
>WENV183087803
OLJO01001942
[OLJO] human gut metagenome; human gut
397
322
-
Ala
GGC
[ENA]
¢þ
>WENV183087749
OLJO01000106
[OLJO] human gut metagenome; human gut
413
498
+
Leu
CAA
[ENA]
¢þ
>WENV183087800
OLJO01001189
[OLJO] human gut metagenome; human gut
436
512
+
His
GTG
[ENA]
¢þ
>WENV183087811
OLJO01002516
[OLJO] human gut metagenome; human gut
437
520
+
Leu
TAG
[ENA]
¢þ
>WENV183087687
OLJO01000005
[OLJO] human gut metagenome; human gut
438
527
+
Ser
TGA
[ENA]
¢þ
>WENV183087822
OLJO01002970
[OLJO] human gut metagenome; human gut
460
533
+
Ala
CGC
[ENA]
¢þ
>WENV183087826
OLJO01002980
[OLJO] human gut metagenome; human gut
492
409
-
Leu
TAG
[ENA]
¢þ
>WENV183087832
OLJO01003736
[OLJO] human gut metagenome; human gut
502
574
+
Gln
TTG
[ENA]
¢þ
>WENV183087821
OLJO01002836
[OLJO] human gut metagenome; human gut
504
430
-
Gly
TCC
[ENA]
¢þ
>WENV183087801
OLJO01001189
[OLJO] human gut metagenome; human gut
516
599
+
Leu
TAG
[ENA]
¢þ
>WENV183087812
OLJO01002516
[OLJO] human gut metagenome; human gut
537
609
+
Thr
TGT
[ENA]
¢þ
>WENV183087688
OLJO01000005
[OLJO] human gut metagenome; human gut
537
610
+
fMet
CAT
[ENA]
¢þ
>WENV183087831
OLJO01003549
[OLJO] human gut metagenome; human gut
550
461
-
Ser
GGA
[ENA]
¢þ
>WENV183087825
OLJO01002980
[OLJO] human gut metagenome; human gut
585
510
-
Lys
TTT
[ENA]
¢þ
>WENV183087772
OLJO01000472
[OLJO] human gut metagenome; human gut
586
661
+
Thr
GGT
[ENA]
¢þ
>WENV183087820
OLJO01002820
[OLJO] human gut metagenome; human gut
596
682
+
Ser
GGA
[ENA]
¢þ
>WENV183087689
OLJO01000005
[OLJO] human gut metagenome; human gut
613
687
+
Phe
GAA
[ENA]
¢þ
>WENV183087813
OLJO01002516
[OLJO] human gut metagenome; human gut
633
704
+
Gly
GCC
[ENA]
¢þ
>WENV183087795
OLJO01000784
[OLJO] human gut metagenome; human gut
644
569
-
Arg
CCG
[ENA]
¢þ
>WENV183087757
OLJO01000146
[OLJO] human gut metagenome; human gut
647
557
-
Ser
GCT
[ENA]
¢þ
>WENV183087824
OLJO01002980
[OLJO] human gut metagenome; human gut
667
593
-
Gln
TTG
[ENA]
¢þ
>WENV183087690
OLJO01000005
[OLJO] human gut metagenome; human gut
702
774
+
Gly
TCC
[ENA]
¢þ
>WENV183087819
OLJO01002794
[OLJO] human gut metagenome; human gut
709
635
-
Ala
TGC
[ENA]
¢þ
>WENV183087814
OLJO01002516
[OLJO] human gut metagenome; human gut
712
797
+
Leu
TAA
[ENA]
¢þ
>WENV183087756
OLJO01000146
[OLJO] human gut metagenome; human gut
724
650
-
Asn
GTT
[ENA]
¢þ
>WENV183087823
OLJO01002980
[OLJO] human gut metagenome; human gut
746
671
-
His
GTG
[ENA]
¢þ
>WENV183087752
OLJO01000129
[OLJO] human gut metagenome; human gut
781
877
+
SeC
TCA
[ENA]
¢þ
>WENV183087816
OLJO01002583
[OLJO] human gut metagenome; human gut
800
727
-
Phe
GAA
[ENA]
¢þ
>WENV183087691
OLJO01000005
[OLJO] human gut metagenome; human gut
807
882
+
Ile
GAT
[ENA]
¢þ
>WENV183087815
OLJO01002516
[OLJO] human gut metagenome; human gut
817
890
+
Arg
ACG
[ENA]
¢þ
>WENV183087817
OLJO01002596
[OLJO] human gut metagenome; human gut
825
750
-
Thr
TGT
[ENA]
¢þ
>WENV183087692
OLJO01000005
[OLJO] human gut metagenome; human gut
885
974
+
Ser
GCT
[ENA]
¢þ
>WENV183087794
OLJO01000784
[OLJO] human gut metagenome; human gut
932
858
-
Trp
CCA
[ENA]
¢þ
>WENV183087802
OLJO01001189
[OLJO] human gut metagenome; human gut
956
870
-
Leu
CAA
[ENA]
¢þ
>WENV183087773
OLJO01000544
[OLJO] human gut metagenome; human gut
990
1063
+
Glu
TTC
[ENA]
¢þ
>WENV183087805
OLJO01002000
[OLJO] human gut metagenome; human gut
1005
1080
+
Glu
TTC
[ENA]
¢þ
>WENV183087793
OLJO01000784
[OLJO] human gut metagenome; human gut
1008
933
-
Phe
GAA
[ENA]
¢þ
>WENV183087774
OLJO01000544
[OLJO] human gut metagenome; human gut
1111
1185
+
Asp
GTC
[ENA]
¢þ
>WENV183087792
OLJO01000784
[OLJO] human gut metagenome; human gut
1154
1078
-
Ile2
CAT
[ENA]
¢þ
>WENV183087791
OLJO01000784
[OLJO] human gut metagenome; human gut
1265
1175
-
Ser
GCT
[ENA]
¢þ
>WENV183087775
OLJO01000603
[OLJO] human gut metagenome; human gut
1303
1378
+
Thr
CGT
[ENA]
¢þ
>WENV183087714
OLJO01000029
[OLJO] human gut metagenome; human gut
1325
1251
-
Ile2
CAT
[ENA]
¢þ
>WENV183087717
OLJO01000037
[OLJO] human gut metagenome; human gut
1351
1422
+
Gln
TTG
[ENA]
¢þ
>WENV183087790
OLJO01000784
[OLJO] human gut metagenome; human gut
1373
1285
-
Ser
TGA
[ENA]
¢þ
>WENV183087789
OLJO01000784
[OLJO] human gut metagenome; human gut
1454
1379
-
Lys
TTT
[ENA]
¢þ
>WENV183087788
OLJO01000784
[OLJO] human gut metagenome; human gut
1535
1459
-
Gln
TTG
[ENA]
¢þ
>WENV183087712
OLJO01000028
[OLJO] human gut metagenome; human gut
1598
1526
-
Val
CAC
[ENA]
¢þ
>WENV183087787
OLJO01000784
[OLJO] human gut metagenome; human gut
1619
1543
-
Arg
TCT
[ENA]
¢þ
>WENV183087786
OLJO01000784
[OLJO] human gut metagenome; human gut
1698
1625
-
Gly
TCC
[ENA]
¢þ
>WENV183087715
OLJO01000035
[OLJO] human gut metagenome; human gut
1721
1796
+
Thr
TGT
[ENA]
¢þ
>WENV183087709
OLJO01000028
[OLJO] human gut metagenome; human gut
1814
1887
+
Gly
GCC
[ENA]
¢þ
>WENV183087785
OLJO01000784
[OLJO] human gut metagenome; human gut
1820
1736
-
Tyr
GTA
[ENA]
¢þ
>WENV183087784
OLJO01000784
[OLJO] human gut metagenome; human gut
1922
1847
-
Thr
TGT
[ENA]
¢þ
>WENV183087713
OLJO01000029
[OLJO] human gut metagenome; human gut
1959
2031
+
Asn
GTT
[ENA]
¢þ
>WENV183087783
OLJO01000784
[OLJO] human gut metagenome; human gut
2004
1928
-
Asp
GTC
[ENA]
¢þ
>WENV183087716
OLJO01000036
[OLJO] human gut metagenome; human gut
2062
2136
+
Pro
CGG
[ENA]
¢þ
>WENV183087797
OLJO01000958
[OLJO] human gut metagenome; human gut
2071
1998
-
Arg
ACG
[ENA]
¢þ
>WENV183087782
OLJO01000784
[OLJO] human gut metagenome; human gut
2111
2036
-
Val
TAC
[ENA]
¢þ
>WENV183087799
OLJO01000970
[OLJO] human gut metagenome; human gut
2115
2041
-
Ala
TGC
[ENA]
¢þ
>WENV183087766
OLJO01000222
[OLJO] human gut metagenome; human gut
2161
2071
-
Ser
GGA
[ENA]
¢þ
>WENV183087796
OLJO01000958
[OLJO] human gut metagenome; human gut
2166
2075
-
Ser
GCT
[ENA]
¢þ
>WENV183087781
OLJO01000784
[OLJO] human gut metagenome; human gut
2193
2119
-
Glu
TTC
[ENA]
¢þ
>WENV183087798
OLJO01000970
[OLJO] human gut metagenome; human gut
2217
2143
-
Ile
GAT
[ENA]
¢þ
>WENV183087710
OLJO01000028
[OLJO] human gut metagenome; human gut
2232
2305
+
Gly
GCC
[ENA]
¢þ
>WENV183087776
OLJO01000608
[OLJO] human gut metagenome; human gut
2234
2309
+
Thr
CGT
[ENA]
¢þ
>WENV183087737
OLJO01000076
[OLJO] human gut metagenome; human gut
2321
2395
+
Arg
TCT
[ENA]
¢þ
>WENV183087711
OLJO01000028
[OLJO] human gut metagenome; human gut
2333
2404
+
Cys
GCA
[ENA]
¢þ
>WENV183087780
OLJO01000784
[OLJO] human gut metagenome; human gut
2583
2507
-
Met
CAT
[ENA]
¢þ
>WENV183087779
OLJO01000784
[OLJO] human gut metagenome; human gut
2684
2608
-
fMet
CAT
[ENA]
¢þ
>WENV183087778
OLJO01000784
[OLJO] human gut metagenome; human gut
2777
2689
-
Leu
TAA
[ENA]
¢þ
>WENV183087777
OLJO01000784
[OLJO] human gut metagenome; human gut
2855
2781
-
Asn
GTT
[ENA]
¢þ
>WENV183087741
OLJO01000085
[OLJO] human gut metagenome; human gut
3239
3166
-
Arg
CCT
[ENA]
¢þ
>WENV183087703
OLJO01000023
[OLJO] human gut metagenome; human gut
3472
3399
-
Lys
TTT
[ENA]
¢þ
>WENV183087702
OLJO01000023
[OLJO] human gut metagenome; human gut
3554
3479
-
Thr
TGT
[ENA]
¢þ
>WENV183087701
OLJO01000023
[OLJO] human gut metagenome; human gut
3636
3561
-
Val
TAC
[ENA]
¢þ
>WENV183087769
OLJO01000447
[OLJO] human gut metagenome; human gut
3688
3762
+
Asn
GTT
[ENA]
¢þ
>WENV183087770
OLJO01000447
[OLJO] human gut metagenome; human gut
3778
3852
+
Asn
GTT
[ENA]
¢þ
>WENV183087771
OLJO01000447
[OLJO] human gut metagenome; human gut
3865
3939
+
Asn
GTT
[ENA]
¢þ
>WENV183087734
OLJO01000061
[OLJO] human gut metagenome; human gut
4381
4308
-
Gly
TCC
[ENA]
¢þ
>WENV183087733
OLJO01000061
[OLJO] human gut metagenome; human gut
4487
4561
+
Pro
TGG
[ENA]
¢þ
>WENV183087765
OLJO01000203
[OLJO] human gut metagenome; human gut
4650
4579
-
Arg
CCT
[ENA]
¢þ
>WENV183087705
OLJO01000025
[OLJO] human gut metagenome; human gut
5557
5644
+
Ser
GCT
[ENA]
¢þ
>WENV183087761
OLJO01000164
[OLJO] human gut metagenome; human gut
5624
5697
+
fMet
CAT
[ENA]
¢þ
>WENV183087762
OLJO01000164
[OLJO] human gut metagenome; human gut
5712
5784
+
Asp
GTC
[ENA]
¢þ
>WENV183087751
OLJO01000108
[OLJO] human gut metagenome; human gut
5846
5772
-
fMet
CAT
[ENA]
¢þ
>WENV183087768
OLJO01000404
[OLJO] human gut metagenome; human gut
5968
5895
-
Arg
ACG
[ENA]
¢þ
>WENV183087760
OLJO01000160
[OLJO] human gut metagenome; human gut
6147
6058
-
Ser
CGA
[ENA]
¢þ
>WENV183087750
OLJO01000107
[OLJO] human gut metagenome; human gut
7334
7408
+
Val
TAC
[ENA]
¢þ
>WENV183087694
OLJO01000006
[OLJO] human gut metagenome; human gut
7488
7399
-
Ser
CGA
[ENA]
¢þ
>WENV183087693
OLJO01000006
[OLJO] human gut metagenome; human gut
7576
7491
-
Leu
CAG
[ENA]
¢þ
>WENV183087743
OLJO01000099
[OLJO] human gut metagenome; human gut
7579
7665
+
Ser
CGA
[ENA]
¢þ
>WENV183087767
OLJO01000262
[OLJO] human gut metagenome; human gut
7608
7537
-
Arg
CCG
[ENA]
¢þ
>WENV183087720
OLJO01000039
[OLJO] human gut metagenome; human gut
7697
7771
+
Thr
GGT
[ENA]
¢þ
>WENV183087719
OLJO01000038
[OLJO] human gut metagenome; human gut
7922
7847
-
Lys
TTT
[ENA]
¢þ
>WENV183087704
OLJO01000024
[OLJO] human gut metagenome; human gut
7923
7850
-
Gly
CCC
[ENA]
¢þ
>WENV183087738
OLJO01000077
[OLJO] human gut metagenome; human gut
7944
8019
+
Ala
CGC
[ENA]
¢þ
>WENV183087740
OLJO01000080
[OLJO] human gut metagenome; human gut
8653
8578
-
Lys
CTT
[ENA]
¢þ
>WENV183087764
OLJO01000202
[OLJO] human gut metagenome; human gut
9049
9124
+
Ala
TGC
[ENA]
¢þ
>WENV183087763
OLJO01000195
[OLJO] human gut metagenome; human gut
9213
9305
+
Ser
TGA
[ENA]
¢þ
>WENV183087742
OLJO01000090
[OLJO] human gut metagenome; human gut
9481
9392
-
Ser
GGA
[ENA]
¢þ
>WENV183087758
OLJO01000158
[OLJO] human gut metagenome; human gut
9690
9761
+
Glu
TTC
[ENA]
¢þ
>WENV183087759
OLJO01000158
[OLJO] human gut metagenome; human gut
9814
9904
+
Ser
GGA
[ENA]
¢þ
>WENV183087736
OLJO01000075
[OLJO] human gut metagenome; human gut
11652
11728
+
Pro
TGG
[ENA]
¢þ
>WENV183087735
OLJO01000069
[OLJO] human gut metagenome; human gut
11731
11819
+
Leu
GAG
[ENA]
¢þ
>WENV183087755
OLJO01000130
[OLJO] human gut metagenome; human gut
12377
12306
-
Arg
CCG
[ENA]
¢þ
>WENV183087730
OLJO01000051
[OLJO] human gut metagenome; human gut
12554
12639
+
Leu
AAG
[ENA]
¢þ
>WENV183087754
OLJO01000130
[OLJO] human gut metagenome; human gut
13893
13822
-
Gln
TTG
[ENA]
¢þ
>WENV183087753
OLJO01000130
[OLJO] human gut metagenome; human gut
13984
13902
-
Tyr
GTA
[ENA]
¢þ
>WENV183087707
OLJO01000025
[OLJO] human gut metagenome; human gut
14374
14287
-
Ser
TGA
[ENA]
¢þ
>WENV183087726
OLJO01000047
[OLJO] human gut metagenome; human gut
15424
15498
+
Pro
GGG
[ENA]
¢þ
>WENV183087727
OLJO01000049
[OLJO] human gut metagenome; human gut
15486
15570
+
Leu
TAG
[ENA]
¢þ
>WENV183087744
OLJO01000103
[OLJO] human gut metagenome; human gut
17154
17229
+
Arg
CCT
[ENA]
¢þ
>WENV183087729
OLJO01000049
[OLJO] human gut metagenome; human gut
17368
17295
-
Lys
CTT
[ENA]
¢þ
>WENV183087728
OLJO01000049
[OLJO] human gut metagenome; human gut
17477
17404
-
Lys
CTT
[ENA]
¢þ
>WENV183087739
OLJO01000079
[OLJO] human gut metagenome; human gut
17868
17941
+
Arg
TCT
[ENA]
¢þ
>WENV183087721
OLJO01000040
[OLJO] human gut metagenome; human gut
18310
18393
+
Tyr
GTA
[ENA]
¢þ
>WENV183087722
OLJO01000040
[OLJO] human gut metagenome; human gut
18484
18557
+
Thr
GGT
[ENA]
¢þ
>WENV183087723
OLJO01000040
[OLJO] human gut metagenome; human gut
18578
18652
+
Met
CAT
[ENA]
¢þ
>WENV183087732
OLJO01000056
[OLJO] human gut metagenome; human gut
18792
18865
+
Arg
CCG
[ENA]
¢þ
>WENV183087718
OLJO01000037
[OLJO] human gut metagenome; human gut
18801
18877
+
Leu
TAA
[ENA]
¢þ
>WENV183087731
OLJO01000051
[OLJO] human gut metagenome; human gut
20419
20491
+
Thr
CGT
[ENA]
¢þ
>WENV183087695
OLJO01000012
[OLJO] human gut metagenome; human gut
20630
20700
+
Cys
GCA
[ENA]
¢þ
>WENV183087725
OLJO01000041
[OLJO] human gut metagenome; human gut
21106
21022
-
Leu
CAG
[ENA]
¢þ
>WENV183087724
OLJO01000040
[OLJO] human gut metagenome; human gut
25712
25787
+
Trp
CCA
[ENA]
¢þ
>WENV183087696
OLJO01000013
[OLJO] human gut metagenome; human gut
27585
27657
+
Gln
CTG
[ENA]
¢þ
>WENV183087697
OLJO01000013
[OLJO] human gut metagenome; human gut
27685
27760
+
Glu
CTC
[ENA]
¢þ
>WENV183087706
OLJO01000025
[OLJO] human gut metagenome; human gut
35082
35169
+
Ser
GGA
[ENA]
¢þ
>WENV183087699
OLJO01000015
[OLJO] human gut metagenome; human gut
37901
37828
-
Ala
GGC
[ENA]
¢þ
>WENV183087708
OLJO01000027
[OLJO] human gut metagenome; human gut
38594
38509
-
Leu
GAG
[ENA]
¢þ
>WENV183087700
OLJO01000019
[OLJO] human gut metagenome; human gut
39354
39278
-
Leu
CAA
[ENA]
¢þ
>WENV183087698
OLJO01000013
[OLJO] human gut metagenome; human gut
46987
46912
-
His
GTG
[ENA]
¢þ
>WENV183087682
OLJO01000003
[OLJO] human gut metagenome; human gut
62277
62352
+
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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