This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLKD] human gut metagenome; human gut
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183090631
OLKD01000006
[OLKD] human gut metagenome; human gut
137
64
-
Gly
TCC
[ENA]
¢þ
>WENV183090646
OLKD01001228
[OLKD] human gut metagenome; human gut
233
305
+
Thr
GGT
[ENA]
¢þ
>WENV183090630
OLKD01000006
[OLKD] human gut metagenome; human gut
245
159
-
Leu
GAG
[ENA]
¢þ
>WENV183090647
OLKD01001783
[OLKD] human gut metagenome; human gut
542
469
-
Gln
TTG
[ENA]
¢þ
>WENV183090644
OLKD01000420
[OLKD] human gut metagenome; human gut
603
678
+
Asn
GTT
[ENA]
¢þ
>WENV183090645
OLKD01000630
[OLKD] human gut metagenome; human gut
822
749
-
Arg
CCG
[ENA]
¢þ
>WENV183090643
OLKD01000306
[OLKD] human gut metagenome; human gut
1242
1313
+
Trp
CCA
[ENA]
¢þ
>WENV183090632
OLKD01000025
[OLKD] human gut metagenome; human gut
3316
3387
+
Arg
CCG
[ENA]
¢þ
>WENV183090642
OLKD01000101
[OLKD] human gut metagenome; human gut
4731
4641
-
Ser
GGA
[ENA]
¢þ
>WENV183090641
OLKD01000086
[OLKD] human gut metagenome; human gut
5292
5209
-
Leu
CAA
[ENA]
¢þ
>WENV183090640
OLKD01000086
[OLKD] human gut metagenome; human gut
5490
5417
-
Cys
GCA
[ENA]
¢þ
>WENV183090639
OLKD01000086
[OLKD] human gut metagenome; human gut
5567
5496
-
Gln
TTG
[ENA]
¢þ
>WENV183090638
OLKD01000086
[OLKD] human gut metagenome; human gut
5651
5578
-
His
GTG
[ENA]
¢þ
>WENV183090637
OLKD01000086
[OLKD] human gut metagenome; human gut
5727
5654
-
Trp
CCA
[ENA]
¢þ
>WENV183090636
OLKD01000086
[OLKD] human gut metagenome; human gut
5819
5736
-
Tyr
GTA
[ENA]
¢þ
>WENV183090635
OLKD01000086
[OLKD] human gut metagenome; human gut
5899
5824
-
Thr
TGT
[ENA]
¢þ
>WENV183090633
OLKD01000031
[OLKD] human gut metagenome; human gut
27792
27865
+
fMet
CAT
[ENA]
¢þ
>WENV183090634
OLKD01000031
[OLKD] human gut metagenome; human gut
27880
27955
+
Asp
GTC
[ENA]
¢þ
>WENV183090625
OLKD01000005
[OLKD] human gut metagenome; human gut
76104
76196
+
Ser
TGA
[ENA]
¢þ
>WENV183090624
OLKD01000002
[OLKD] human gut metagenome; human gut
77897
77971
+
Arg
TCT
[ENA]
¢þ
>WENV183090629
OLKD01000006
[OLKD] human gut metagenome; human gut
82357
82284
-
Lys
TTT
[ENA]
¢þ
>WENV183090628
OLKD01000006
[OLKD] human gut metagenome; human gut
82435
82361
-
Gln
TTG
[ENA]
¢þ
>WENV183090627
OLKD01000006
[OLKD] human gut metagenome; human gut
82523
82440
-
Tyr
GTA
[ENA]
¢þ
>WENV183090626
OLKD01000006
[OLKD] human gut metagenome; human gut
82615
82540
-
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK