This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLNB] human gut metagenome; human gut
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183093631
OLNB01001000
[OLNB] human gut metagenome; human gut
32
104
+
Thr
GGT
[ENA]
¢þ
>WENV183093640
OLNB01003088
[OLNB] human gut metagenome; human gut
74
1
-
Lys
CTT
[ENA]
¢þ
>WENV183093646
OLNB01003895
[OLNB] human gut metagenome; human gut
78
5
-
Trp
CCA
[ENA]
¢þ
>WENV183093654
OLNB01005618
[OLNB] human gut metagenome; human gut
78
152
+
Thr
TGT
[ENA]
¢þ
>WENV183093663
OLNB01006493
[OLNB] human gut metagenome; human gut
95
170
+
Ala
TGC
[ENA]
¢þ
>WENV183093657
OLNB01006256
[OLNB] human gut metagenome; human gut
96
169
+
Glu
CTC
[ENA]
¢þ
>WENV183093621
OLNB01000344
[OLNB] human gut metagenome; human gut
132
59
-
Lys
CTT
[ENA]
¢þ
>WENV183093617
OLNB01000269
[OLNB] human gut metagenome; human gut
148
222
+
Arg
CCT
[ENA]
¢þ
>WENV183093662
OLNB01006463
[OLNB] human gut metagenome; human gut
154
230
+
Arg
ACG
[ENA]
¢þ
>WENV183093641
OLNB01003336
[OLNB] human gut metagenome; human gut
155
229
+
Ala
GGC
[ENA]
¢þ
>WENV183093655
OLNB01005618
[OLNB] human gut metagenome; human gut
183
258
+
Pro
TGG
[ENA]
¢þ
>WENV183093658
OLNB01006256
[OLNB] human gut metagenome; human gut
207
281
+
Gln
CTG
[ENA]
¢þ
>WENV183093639
OLNB01002755
[OLNB] human gut metagenome; human gut
234
316
+
Leu
CAA
[ENA]
¢þ
>WENV183093633
OLNB01001795
[OLNB] human gut metagenome; human gut
257
332
+
Val
GAC
[ENA]
¢þ
>WENV183093653
OLNB01005487
[OLNB] human gut metagenome; human gut
270
196
-
Ala
TGC
[ENA]
¢þ
>WENV183093649
OLNB01005374
[OLNB] human gut metagenome; human gut
273
345
+
Phe
GAA
[ENA]
¢þ
>WENV183093647
OLNB01004235
[OLNB] human gut metagenome; human gut
291
219
-
Arg
CCT
[ENA]
¢þ
>WENV183093616
OLNB01000258
[OLNB] human gut metagenome; human gut
297
370
+
Pro
CGG
[ENA]
¢þ
>WENV183093614
OLNB01000046
[OLNB] human gut metagenome; human gut
301
216
-
Ser
TGA
[ENA]
¢þ
>WENV183093637
OLNB01002752
[OLNB] human gut metagenome; human gut
324
398
+
Ile
GAT
[ENA]
¢þ
>WENV183093644
OLNB01003484
[OLNB] human gut metagenome; human gut
358
284
-
fMet
CAT
[ENA]
¢þ
>WENV183093652
OLNB01005487
[OLNB] human gut metagenome; human gut
361
287
-
Ile
GAT
[ENA]
¢þ
>WENV183093659
OLNB01006309
[OLNB] human gut metagenome; human gut
369
296
-
Pro
CGG
[ENA]
¢þ
>WENV183093650
OLNB01005374
[OLNB] human gut metagenome; human gut
377
452
+
Gly
GCC
[ENA]
¢þ
>WENV183093656
OLNB01005788
[OLNB] human gut metagenome; human gut
390
465
+
Arg
TCT
[ENA]
¢þ
>WENV183093638
OLNB01002752
[OLNB] human gut metagenome; human gut
423
497
+
Ala
TGC
[ENA]
¢þ
>WENV183093636
OLNB01002357
[OLNB] human gut metagenome; human gut
424
509
+
Ser
TGA
[ENA]
¢þ
>WENV183093648
OLNB01004366
[OLNB] human gut metagenome; human gut
439
519
+
Leu
TAA
[ENA]
¢þ
>WENV183093661
OLNB01006427
[OLNB] human gut metagenome; human gut
456
375
-
Leu
TAG
[ENA]
¢þ
>WENV183093645
OLNB01003489
[OLNB] human gut metagenome; human gut
458
376
-
Tyr
GTA
[ENA]
¢þ
>WENV183093660
OLNB01006312
[OLNB] human gut metagenome; human gut
469
395
-
Ile2
CAT
[ENA]
¢þ
>WENV183093651
OLNB01005374
[OLNB] human gut metagenome; human gut
481
552
+
Cys
GCA
[ENA]
¢þ
>WENV183093629
OLNB01000735
[OLNB] human gut metagenome; human gut
489
413
-
Asp
GTC
[ENA]
¢þ
>WENV183093612
OLNB01000017
[OLNB] human gut metagenome; human gut
494
420
-
Asn
GTT
[ENA]
¢þ
>WENV183093632
OLNB01001585
[OLNB] human gut metagenome; human gut
521
449
-
Glu
TTC
[ENA]
¢þ
>WENV183093643
OLNB01003484
[OLNB] human gut metagenome; human gut
551
479
-
Thr
TGT
[ENA]
¢þ
>WENV183093625
OLNB01000623
[OLNB] human gut metagenome; human gut
598
526
-
Glu
CTC
[ENA]
¢þ
>WENV183093642
OLNB01003484
[OLNB] human gut metagenome; human gut
635
563
-
Glu
TTC
[ENA]
¢þ
>WENV183093624
OLNB01000623
[OLNB] human gut metagenome; human gut
691
603
-
Ser
GCT
[ENA]
¢þ
>WENV183093635
OLNB01002027
[OLNB] human gut metagenome; human gut
778
687
-
Ser
GGA
[ENA]
¢þ
>WENV183093634
OLNB01002027
[OLNB] human gut metagenome; human gut
872
785
-
Ser
TGA
[ENA]
¢þ
>WENV183093627
OLNB01000687
[OLNB] human gut metagenome; human gut
1085
1158
+
Gly
GCC
[ENA]
¢þ
>WENV183093628
OLNB01000687
[OLNB] human gut metagenome; human gut
1205
1286
+
Leu
CAG
[ENA]
¢þ
>WENV183093622
OLNB01000410
[OLNB] human gut metagenome; human gut
1295
1223
-
Glu
TTC
[ENA]
¢þ
>WENV183093630
OLNB01000814
[OLNB] human gut metagenome; human gut
1416
1498
+
Leu
CAA
[ENA]
¢þ
>WENV183093626
OLNB01000626
[OLNB] human gut metagenome; human gut
1485
1558
+
Phe
GAA
[ENA]
¢þ
>WENV183093620
OLNB01000338
[OLNB] human gut metagenome; human gut
1826
1753
-
Gly
CCC
[ENA]
¢þ
>WENV183093619
OLNB01000286
[OLNB] human gut metagenome; human gut
1841
1755
-
Leu
TAA
[ENA]
¢þ
>WENV183093618
OLNB01000286
[OLNB] human gut metagenome; human gut
1923
1850
-
Gly
GCC
[ENA]
¢þ
>WENV183093623
OLNB01000518
[OLNB] human gut metagenome; human gut
2016
1945
-
Gln
CTG
[ENA]
¢þ
>WENV183093615
OLNB01000134
[OLNB] human gut metagenome; human gut
2200
2283
+
Tyr
GTA
[ENA]
¢þ
>WENV183093613
OLNB01000032
[OLNB] human gut metagenome; human gut
2850
2775
-
Pro
GGG
[ENA]
¢þ
>WENV183093611
OLNB01000010
[OLNB] human gut metagenome; human gut
3082
3000
-
Leu
TAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK