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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OLSY] human gut metagenome; faeces
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183306632
OLSY01000706
[OLSY] human gut metagenome; faeces
17
92
+
Ala
TGC
[ENA]
¢þ
>WENV183306622
OLSY01000040
[OLSY] human gut metagenome; faeces
30
115
+
Leu
GAG
[ENA]
¢þ
>WENV183306628
OLSY01000268
[OLSY] human gut metagenome; faeces
84
159
+
Arg
CCT
[ENA]
¢þ
>WENV183306629
OLSY01000302
[OLSY] human gut metagenome; faeces
132
207
+
Gly
GCC
[ENA]
¢þ
>WENV183306631
OLSY01000368
[OLSY] human gut metagenome; faeces
170
96
-
Gly
CCC
[ENA]
¢þ
>WENV183306630
OLSY01000302
[OLSY] human gut metagenome; faeces
237
309
+
Cys
GCA
[ENA]
¢þ
>WENV183306627
OLSY01000220
[OLSY] human gut metagenome; faeces
532
456
-
Ile
GAT
[ENA]
¢þ
>WENV183306626
OLSY01000220
[OLSY] human gut metagenome; faeces
664
591
-
Ala
TGC
[ENA]
¢þ
>WENV183306624
OLSY01000148
[OLSY] human gut metagenome; faeces
687
613
-
Ala
TGC
[ENA]
¢þ
>WENV183306625
OLSY01000212
[OLSY] human gut metagenome; faeces
708
617
-
Ser
GCT
[ENA]
¢þ
>WENV183306623
OLSY01000148
[OLSY] human gut metagenome; faeces
851
777
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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