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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OLTJ] human gut metagenome; faeces
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183307586
OLTJ01002627
[OLTJ] human gut metagenome; faeces
35
109
+
Val
TAC
[ENA]
¢þ
>WENV183307577
OLTJ01001442
[OLTJ] human gut metagenome; faeces
61
136
+
Ala
TGC
[ENA]
¢þ
>WENV183307574
OLTJ01001264
[OLTJ] human gut metagenome; faeces
86
169
+
Tyr
GTA
[ENA]
¢þ
>WENV183307604
OLTJ01003883
[OLTJ] human gut metagenome; faeces
121
46
-
Val
TAC
[ENA]
¢þ
>WENV183307598
OLTJ01003408
[OLTJ] human gut metagenome; faeces
125
51
-
Glu
CTC
[ENA]
¢þ
>WENV183307593
OLTJ01002708
[OLTJ] human gut metagenome; faeces
127
57
-
Gly
TCC
[ENA]
¢þ
>WENV183307587
OLTJ01002627
[OLTJ] human gut metagenome; faeces
134
206
+
Thr
TGT
[ENA]
¢þ
>WENV183307595
OLTJ01003276
[OLTJ] human gut metagenome; faeces
158
233
+
Trp
CCA
[ENA]
¢þ
>WENV183307566
OLTJ01000409
[OLTJ] human gut metagenome; faeces
161
236
+
Ala
TGC
[ENA]
¢þ
>WENV183307575
OLTJ01001264
[OLTJ] human gut metagenome; faeces
171
258
+
Leu
TAA
[ENA]
¢þ
>WENV183307578
OLTJ01001442
[OLTJ] human gut metagenome; faeces
177
253
+
Ile
GAT
[ENA]
¢þ
>WENV183307603
OLTJ01003876
[OLTJ] human gut metagenome; faeces
188
113
-
Trp
CCA
[ENA]
¢þ
>WENV183307596
OLTJ01003349
[OLTJ] human gut metagenome; faeces
204
132
-
Glu
CTC
[ENA]
¢þ
>WENV183307597
OLTJ01003408
[OLTJ] human gut metagenome; faeces
206
131
-
Lys
CTT
[ENA]
¢þ
>WENV183307588
OLTJ01002627
[OLTJ] human gut metagenome; faeces
210
285
+
Ile2
CAT
[ENA]
¢þ
>WENV183307592
OLTJ01002708
[OLTJ] human gut metagenome; faeces
217
144
-
Gly
GCC
[ENA]
¢þ
>WENV183307585
OLTJ01002588
[OLTJ] human gut metagenome; faeces
231
140
-
Ser
GGA
[ENA]
¢þ
>WENV183307567
OLTJ01000409
[OLTJ] human gut metagenome; faeces
240
316
+
Ile
GAT
[ENA]
¢þ
>WENV183307600
OLTJ01003656
[OLTJ] human gut metagenome; faeces
245
316
+
Asn
GTT
[ENA]
¢þ
>WENV183307605
OLTJ01004272
[OLTJ] human gut metagenome; faeces
265
348
+
Leu
GAG
[ENA]
¢þ
>WENV183307602
OLTJ01003876
[OLTJ] human gut metagenome; faeces
272
196
-
Ile2
CAT
[ENA]
¢þ
>WENV183307589
OLTJ01002627
[OLTJ] human gut metagenome; faeces
299
374
+
Asp
GTC
[ENA]
¢þ
>WENV183307583
OLTJ01002364
[OLTJ] human gut metagenome; faeces
344
270
-
Val
GAC
[ENA]
¢þ
>WENV183307584
OLTJ01002588
[OLTJ] human gut metagenome; faeces
364
278
-
Ser
TGA
[ENA]
¢þ
>WENV183307568
OLTJ01000788
[OLTJ] human gut metagenome; faeces
369
442
+
Ala
TGC
[ENA]
¢þ
>WENV183307601
OLTJ01003656
[OLTJ] human gut metagenome; faeces
371
443
+
Glu
TTC
[ENA]
¢þ
>WENV183307579
OLTJ01001566
[OLTJ] human gut metagenome; faeces
380
304
-
Arg
ACG
[ENA]
¢þ
>WENV183307573
OLTJ01000973
[OLTJ] human gut metagenome; faeces
383
309
-
Cys
GCA
[ENA]
¢þ
>WENV183307562
OLTJ01000124
[OLTJ] human gut metagenome; faeces
406
479
+
Asn
GTT
[ENA]
¢þ
>WENV183307590
OLTJ01002627
[OLTJ] human gut metagenome; faeces
410
484
+
Val
TAC
[ENA]
¢þ
>WENV183307594
OLTJ01003227
[OLTJ] human gut metagenome; faeces
415
490
+
Lys
TTT
[ENA]
¢þ
>WENV183307582
OLTJ01002364
[OLTJ] human gut metagenome; faeces
423
348
-
Gly
GCC
[ENA]
¢þ
>WENV183307576
OLTJ01001303
[OLTJ] human gut metagenome; faeces
437
352
-
Ser
TGA
[ENA]
¢þ
>WENV183307569
OLTJ01000788
[OLTJ] human gut metagenome; faeces
464
539
+
Ile
GAT
[ENA]
¢þ
>WENV183307572
OLTJ01000973
[OLTJ] human gut metagenome; faeces
488
413
-
Gly
GCC
[ENA]
¢þ
>WENV183307599
OLTJ01003586
[OLTJ] human gut metagenome; faeces
489
415
-
Pro
CGG
[ENA]
¢þ
>WENV183307591
OLTJ01002627
[OLTJ] human gut metagenome; faeces
489
571
+
Tyr
GTA
[ENA]
¢þ
>WENV183307563
OLTJ01000124
[OLTJ] human gut metagenome; faeces
515
587
+
Cys
GCA
[ENA]
¢þ
>WENV183307565
OLTJ01000246
[OLTJ] human gut metagenome; faeces
530
605
+
Val
GAC
[ENA]
¢þ
>WENV183307581
OLTJ01002364
[OLTJ] human gut metagenome; faeces
539
466
-
Cys
GCA
[ENA]
¢þ
>WENV183307580
OLTJ01001990
[OLTJ] human gut metagenome; faeces
546
620
+
Arg
ACG
[ENA]
¢þ
>WENV183307571
OLTJ01000973
[OLTJ] human gut metagenome; faeces
601
526
-
Phe
GAA
[ENA]
¢þ
>WENV183307570
OLTJ01000944
[OLTJ] human gut metagenome; faeces
666
739
+
Lys
TTT
[ENA]
¢þ
>WENV183307561
OLTJ01000053
[OLTJ] human gut metagenome; faeces
721
796
+
Lys
CTT
[ENA]
¢þ
>WENV183307564
OLTJ01000194
[OLTJ] human gut metagenome; faeces
965
885
-
Leu
TAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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