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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OLUE] human gut metagenome; faeces
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183308542
OLUE01001393
[OLUE] human gut metagenome; faeces
70
144
+
Met
CAT
[ENA]
¢þ
>WENV183308554
OLUE01003346
[OLUE] human gut metagenome; faeces
109
180
+
Glu
CTC
[ENA]
¢þ
>WENV183308535
OLUE01000383
[OLUE] human gut metagenome; faeces
119
34
-
Leu
CAG
[ENA]
¢þ
>WENV183308555
OLUE01003759
[OLUE] human gut metagenome; faeces
142
53
-
Ser
GCT
[ENA]
¢þ
>WENV183308532
OLUE01000340
[OLUE] human gut metagenome; faeces
180
109
-
Thr
GGT
[ENA]
¢þ
>WENV183308543
OLUE01001420
[OLUE] human gut metagenome; faeces
184
257
+
Glu
TTC
[ENA]
¢þ
>WENV183308551
OLUE01002858
[OLUE] human gut metagenome; faeces
221
295
+
Pro
CGG
[ENA]
¢þ
>WENV183308545
OLUE01001521
[OLUE] human gut metagenome; faeces
249
321
+
Gln
CTG
[ENA]
¢þ
>WENV183308544
OLUE01001420
[OLUE] human gut metagenome; faeces
272
343
+
Cys
GCA
[ENA]
¢þ
>WENV183308547
OLUE01001667
[OLUE] human gut metagenome; faeces
326
243
-
Leu
CAA
[ENA]
¢þ
>WENV183308553
OLUE01003041
[OLUE] human gut metagenome; faeces
432
357
-
Ile
GAT
[ENA]
¢þ
>WENV183308550
OLUE01002846
[OLUE] human gut metagenome; faeces
453
383
-
Gly
CCC
[ENA]
¢þ
>WENV183308556
OLUE01005035
[OLUE] human gut metagenome; faeces
476
402
-
Met
CAT
[ENA]
¢þ
>WENV183308552
OLUE01003041
[OLUE] human gut metagenome; faeces
532
458
-
Ala
TGC
[ENA]
¢þ
>WENV183308541
OLUE01001153
[OLUE] human gut metagenome; faeces
535
607
+
Arg
CCT
[ENA]
¢þ
>WENV183308538
OLUE01000825
[OLUE] human gut metagenome; faeces
656
583
-
Lys
CTT
[ENA]
¢þ
>WENV183308549
OLUE01002230
[OLUE] human gut metagenome; faeces
717
791
+
Asp
GTC
[ENA]
¢þ
>WENV183308548
OLUE01002096
[OLUE] human gut metagenome; faeces
807
735
-
Thr
CGT
[ENA]
¢þ
>WENV183308534
OLUE01000369
[OLUE] human gut metagenome; faeces
857
770
-
Leu
TAA
[ENA]
¢þ
>WENV183308540
OLUE01001082
[OLUE] human gut metagenome; faeces
946
872
-
Asn
GTT
[ENA]
¢þ
>WENV183308533
OLUE01000369
[OLUE] human gut metagenome; faeces
950
876
-
Val
TAC
[ENA]
¢þ
>WENV183308546
OLUE01001656
[OLUE] human gut metagenome; faeces
1036
950
-
Leu
AAG
[ENA]
¢þ
>WENV183308523
OLUE01000045
[OLUE] human gut metagenome; faeces
1054
981
-
Gly
GCC
[ENA]
¢þ
>WENV183308522
OLUE01000045
[OLUE] human gut metagenome; faeces
1130
1059
-
Gly
TCC
[ENA]
¢þ
>WENV183308539
OLUE01000833
[OLUE] human gut metagenome; faeces
1162
1089
-
Pro
GGG
[ENA]
¢þ
>WENV183308536
OLUE01000426
[OLUE] human gut metagenome; faeces
1164
1252
+
Ser
CGA
[ENA]
¢þ
>WENV183308524
OLUE01000116
[OLUE] human gut metagenome; faeces
1209
1135
-
Arg
ACG
[ENA]
¢þ
>WENV183308521
OLUE01000045
[OLUE] human gut metagenome; faeces
1232
1157
-
Pro
TGG
[ENA]
¢þ
>WENV183308537
OLUE01000426
[OLUE] human gut metagenome; faeces
1362
1433
+
Trp
CCA
[ENA]
¢þ
>WENV183308531
OLUE01000292
[OLUE] human gut metagenome; faeces
1901
1815
-
Leu
AAG
[ENA]
¢þ
>WENV183308530
OLUE01000207
[OLUE] human gut metagenome; faeces
1954
1869
-
Leu
TAG
[ENA]
¢þ
>WENV183308529
OLUE01000207
[OLUE] human gut metagenome; faeces
2124
2050
-
Lys
TTT
[ENA]
¢þ
>WENV183308528
OLUE01000207
[OLUE] human gut metagenome; faeces
2252
2178
-
Phe
GAA
[ENA]
¢þ
>WENV183308527
OLUE01000207
[OLUE] human gut metagenome; faeces
2330
2256
-
fMet
CAT
[ENA]
¢þ
>WENV183308526
OLUE01000207
[OLUE] human gut metagenome; faeces
2429
2355
-
Thr
TGT
[ENA]
¢þ
>WENV183308525
OLUE01000207
[OLUE] human gut metagenome; faeces
2527
2445
-
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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