This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLYS] human gut metagenome; feces
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183385911
OLYS01007063
[OLYS] human gut metagenome; feces
1
75
+
Thr
TGT
[ENA]
¢þ
>WENV183385896
OLYS01004971
[OLYS] human gut metagenome; feces
23
97
+
Asn
GTT
[ENA]
¢þ
>WENV183385843
OLYS01000384
[OLYS] human gut metagenome; feces
39
114
+
Ala
TGC
[ENA]
¢þ
>WENV183385918
OLYS01008033
[OLYS] human gut metagenome; feces
51
126
+
Val
TAC
[ENA]
¢þ
>WENV183385878
OLYS01003318
[OLYS] human gut metagenome; feces
78
3
-
Thr
TGT
[ENA]
¢þ
>WENV183385919
OLYS01008738
[OLYS] human gut metagenome; feces
80
152
+
Val
TAC
[ENA]
¢þ
>WENV183385916
OLYS01007905
[OLYS] human gut metagenome; feces
80
156
+
fMet
CAT
[ENA]
¢þ
>WENV183385842
OLYS01000382
[OLYS] human gut metagenome; feces
88
170
+
Leu
TAG
[ENA]
¢þ
>WENV183385852
OLYS01001640
[OLYS] human gut metagenome; feces
107
180
+
Trp
CCA
[ENA]
¢þ
>WENV183385912
OLYS01007063
[OLYS] human gut metagenome; feces
109
192
+
Tyr
GTA
[ENA]
¢þ
>WENV183385877
OLYS01003190
[OLYS] human gut metagenome; feces
113
38
-
Gly
GCC
[ENA]
¢þ
>WENV183385891
OLYS01003950
[OLYS] human gut metagenome; feces
114
189
+
Ala
TGC
[ENA]
¢þ
>WENV183385844
OLYS01000384
[OLYS] human gut metagenome; feces
118
194
+
Ile
GAT
[ENA]
¢þ
>WENV183385873
OLYS01002950
[OLYS] human gut metagenome; feces
123
50
-
Gly
TCC
[ENA]
¢þ
>WENV183385929
OLYS01011717
[OLYS] human gut metagenome; feces
126
53
-
Gly
CCC
[ENA]
¢þ
>WENV183385865
OLYS01002917
[OLYS] human gut metagenome; feces
146
61
-
Leu
GAG
[ENA]
¢þ
>WENV183385910
OLYS01006861
[OLYS] human gut metagenome; feces
151
77
-
Asn
GTT
[ENA]
¢þ
>WENV183385924
OLYS01009068
[OLYS] human gut metagenome; feces
175
84
-
Ser
GCT
[ENA]
¢þ
>WENV183385857
OLYS01001958
[OLYS] human gut metagenome; feces
187
114
-
Lys
CTT
[ENA]
¢þ
>WENV183385860
OLYS01002507
[OLYS] human gut metagenome; feces
191
262
+
Gln
TTG
[ENA]
¢þ
>WENV183385876
OLYS01003190
[OLYS] human gut metagenome; feces
194
119
-
Phe
GAA
[ENA]
¢þ
>WENV183385851
OLYS01001122
[OLYS] human gut metagenome; feces
212
137
-
Lys
CTT
[ENA]
¢þ
>WENV183385897
OLYS01004971
[OLYS] human gut metagenome; feces
215
292
+
Val
TAC
[ENA]
¢þ
>WENV183385884
OLYS01003658
[OLYS] human gut metagenome; feces
226
312
+
Leu
CAA
[ENA]
¢þ
>WENV183385906
OLYS01005787
[OLYS] human gut metagenome; feces
233
145
-
Ser
GGA
[ENA]
¢þ
>WENV183385926
OLYS01010022
[OLYS] human gut metagenome; feces
233
309
+
Arg
CCG
[ENA]
¢þ
>WENV183385887
OLYS01003807
[OLYS] human gut metagenome; feces
237
161
-
Ile2
CAT
[ENA]
¢þ
>WENV183385892
OLYS01003950
[OLYS] human gut metagenome; feces
238
313
+
Ile
GAT
[ENA]
¢þ
>WENV183385917
OLYS01008024
[OLYS] human gut metagenome; feces
239
163
-
Pro
GGG
[ENA]
¢þ
>WENV183385864
OLYS01002917
[OLYS] human gut metagenome; feces
258
175
-
Leu
CAG
[ENA]
¢þ
>WENV183385856
OLYS01001958
[OLYS] human gut metagenome; feces
274
203
-
Cys
GCA
[ENA]
¢þ
>WENV183385913
OLYS01007063
[OLYS] human gut metagenome; feces
284
356
+
Thr
GGT
[ENA]
¢þ
>WENV183385875
OLYS01003190
[OLYS] human gut metagenome; feces
287
212
-
Val
TAC
[ENA]
¢þ
>WENV183385894
OLYS01004108
[OLYS] human gut metagenome; feces
288
363
+
Pro
TGG
[ENA]
¢þ
>WENV183385920
OLYS01008738
[OLYS] human gut metagenome; feces
292
366
+
Glu
TTC
[ENA]
¢þ
>WENV183385923
OLYS01009068
[OLYS] human gut metagenome; feces
295
208
-
Ser
TGA
[ENA]
¢þ
>WENV183385930
OLYS01011852
[OLYS] human gut metagenome; feces
297
369
+
Arg
CCT
[ENA]
¢þ
>WENV183385921
OLYS01009057
[OLYS] human gut metagenome; feces
312
387
+
Arg
TCT
[ENA]
¢þ
>WENV183385904
OLYS01005699
[OLYS] human gut metagenome; feces
316
389
+
Arg
ACG
[ENA]
¢þ
>WENV183385872
OLYS01002950
[OLYS] human gut metagenome; feces
317
237
-
Leu
TAG
[ENA]
¢þ
>WENV183385885
OLYS01003658
[OLYS] human gut metagenome; feces
331
406
+
fMet
CAT
[ENA]
¢þ
>WENV183385883
OLYS01003558
[OLYS] human gut metagenome; feces
335
253
-
Leu
TAG
[ENA]
¢þ
>WENV183385925
OLYS01009928
[OLYS] human gut metagenome; feces
345
420
+
Pro
TGG
[ENA]
¢þ
>WENV183385893
OLYS01003950
[OLYS] human gut metagenome; feces
347
420
+
Ala
TGC
[ENA]
¢þ
>WENV183385900
OLYS01005393
[OLYS] human gut metagenome; feces
356
430
+
Glu
CTC
[ENA]
¢þ
>WENV183385863
OLYS01002917
[OLYS] human gut metagenome; feces
367
292
-
Gly
GCC
[ENA]
¢þ
>WENV183385907
OLYS01005946
[OLYS] human gut metagenome; feces
372
448
+
Val
GAC
[ENA]
¢þ
>WENV183385886
OLYS01003807
[OLYS] human gut metagenome; feces
381
306
-
Asn
GTT
[ENA]
¢þ
>WENV183385932
OLYS01012931
[OLYS] human gut metagenome; feces
390
307
-
Tyr
GTA
[ENA]
¢þ
>WENV183385931
OLYS01012512
[OLYS] human gut metagenome; feces
400
326
-
Pro
GGG
[ENA]
¢þ
>WENV183385850
OLYS01000860
[OLYS] human gut metagenome; feces
406
478
+
Glu
TTC
[ENA]
¢þ
>WENV183385855
OLYS01001879
[OLYS] human gut metagenome; feces
411
338
-
Lys
TTT
[ENA]
¢þ
>WENV183385871
OLYS01002950
[OLYS] human gut metagenome; feces
422
348
-
Lys
TTT
[ENA]
¢þ
>WENV183385862
OLYS01002708
[OLYS] human gut metagenome; feces
435
348
-
Ser
GCT
[ENA]
¢þ
>WENV183385928
OLYS01011439
[OLYS] human gut metagenome; feces
439
364
-
Ala
CGC
[ENA]
¢þ
>WENV183385901
OLYS01005393
[OLYS] human gut metagenome; feces
440
515
+
Lys
CTT
[ENA]
¢þ
>WENV183385927
OLYS01010120
[OLYS] human gut metagenome; feces
475
548
+
fMet
CAT
[ENA]
¢þ
>WENV183385922
OLYS01009057
[OLYS] human gut metagenome; feces
487
561
+
Gln
TTG
[ENA]
¢þ
>WENV183385870
OLYS01002950
[OLYS] human gut metagenome; feces
499
427
-
Gln
TTG
[ENA]
¢þ
>WENV183385840
OLYS01000276
[OLYS] human gut metagenome; feces
518
444
-
Met
CAT
[ENA]
¢þ
>WENV183385915
OLYS01007551
[OLYS] human gut metagenome; feces
527
600
+
Gly
CCC
[ENA]
¢þ
>WENV183385914
OLYS01007167
[OLYS] human gut metagenome; feces
542
467
-
Thr
CGT
[ENA]
¢þ
>WENV183385902
OLYS01005393
[OLYS] human gut metagenome; feces
557
631
+
Glu
CTC
[ENA]
¢þ
>WENV183385898
OLYS01005037
[OLYS] human gut metagenome; feces
584
508
-
fMet
CAT
[ENA]
¢þ
>WENV183385888
OLYS01003849
[OLYS] human gut metagenome; feces
603
674
+
Gln
CTG
[ENA]
¢þ
>WENV183385908
OLYS01006177
[OLYS] human gut metagenome; feces
613
526
-
Leu
CAG
[ENA]
¢þ
>WENV183385869
OLYS01002950
[OLYS] human gut metagenome; feces
622
549
-
His
GTG
[ENA]
¢þ
>WENV183385899
OLYS01005325
[OLYS] human gut metagenome; feces
638
727
+
Ser
GCT
[ENA]
¢þ
>WENV183385874
OLYS01003094
[OLYS] human gut metagenome; feces
650
575
-
Pro
GGG
[ENA]
¢þ
>WENV183385909
OLYS01006203
[OLYS] human gut metagenome; feces
659
586
-
Pro
CGG
[ENA]
¢þ
>WENV183385880
OLYS01003534
[OLYS] human gut metagenome; feces
659
731
+
Asn
GTT
[ENA]
¢þ
>WENV183385903
OLYS01005393
[OLYS] human gut metagenome; feces
673
749
+
Asn
GTT
[ENA]
¢þ
>WENV183385853
OLYS01001775
[OLYS] human gut metagenome; feces
676
602
-
Ala
GGC
[ENA]
¢þ
>WENV183385841
OLYS01000332
[OLYS] human gut metagenome; feces
676
751
+
Pro
CGG
[ENA]
¢þ
>WENV183385889
OLYS01003862
[OLYS] human gut metagenome; feces
682
754
+
Glu
TTC
[ENA]
¢þ
>WENV183385895
OLYS01004697
[OLYS] human gut metagenome; feces
707
623
-
Tyr
GTA
[ENA]
¢þ
>WENV183385854
OLYS01001788
[OLYS] human gut metagenome; feces
716
642
-
Ile2
CAT
[ENA]
¢þ
>WENV183385881
OLYS01003534
[OLYS] human gut metagenome; feces
738
809
+
Glu
TTC
[ENA]
¢þ
>WENV183385861
OLYS01002521
[OLYS] human gut metagenome; feces
742
654
-
Ser
CGA
[ENA]
¢þ
>WENV183385905
OLYS01005707
[OLYS] human gut metagenome; feces
752
678
-
Arg
TCT
[ENA]
¢þ
>WENV183385890
OLYS01003930
[OLYS] human gut metagenome; feces
788
861
+
Gly
GCC
[ENA]
¢þ
>WENV183385868
OLYS01002950
[OLYS] human gut metagenome; feces
802
732
-
Gly
TCC
[ENA]
¢þ
>WENV183385882
OLYS01003534
[OLYS] human gut metagenome; feces
813
884
+
Cys
GCA
[ENA]
¢þ
>WENV183385867
OLYS01002950
[OLYS] human gut metagenome; feces
881
808
-
Phe
GAA
[ENA]
¢þ
>WENV183385879
OLYS01003419
[OLYS] human gut metagenome; feces
913
840
-
Ala
GGC
[ENA]
¢þ
>WENV183385866
OLYS01002950
[OLYS] human gut metagenome; feces
961
887
-
fMet
CAT
[ENA]
¢þ
>WENV183385845
OLYS01000479
[OLYS] human gut metagenome; feces
1057
983
-
Asn
GTT
[ENA]
¢þ
>WENV183385858
OLYS01001989
[OLYS] human gut metagenome; feces
1064
990
-
His
GTG
[ENA]
¢þ
>WENV183385847
OLYS01000641
[OLYS] human gut metagenome; feces
1080
1154
+
Asp
GTC
[ENA]
¢þ
>WENV183385849
OLYS01000760
[OLYS] human gut metagenome; feces
1148
1075
-
Phe
GAA
[ENA]
¢þ
>WENV183385859
OLYS01001990
[OLYS] human gut metagenome; feces
1177
1091
-
Leu
CAG
[ENA]
¢þ
>WENV183385848
OLYS01000689
[OLYS] human gut metagenome; feces
1287
1203
-
Leu
CAA
[ENA]
¢þ
>WENV183385846
OLYS01000619
[OLYS] human gut metagenome; feces
1841
1766
-
Val
TAC
[ENA]
¢þ
>WENV183385835
OLYS01000082
[OLYS] human gut metagenome; feces
2218
2293
+
Ile
GAT
[ENA]
¢þ
>WENV183385838
OLYS01000208
[OLYS] human gut metagenome; feces
2245
2320
+
Ala
TGC
[ENA]
¢þ
>WENV183385839
OLYS01000208
[OLYS] human gut metagenome; feces
2324
2400
+
Ile
GAT
[ENA]
¢þ
>WENV183385836
OLYS01000082
[OLYS] human gut metagenome; feces
2374
2448
+
Ala
TGC
[ENA]
¢þ
>WENV183385837
OLYS01000164
[OLYS] human gut metagenome; feces
2863
2948
+
Ser
TGA
[ENA]
¢þ
>WENV183385834
OLYS01000029
[OLYS] human gut metagenome; feces
8103
8027
-
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK