This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OMEG] human gut metagenome; feces
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183468348
OMEG01002222
[OMEG] human gut metagenome; feces
16
91
+
Thr
TGT
[ENA]
¢þ
>WENV183468384
OMEG01006387
[OMEG] human gut metagenome; feces
37
112
+
Thr
CGT
[ENA]
¢þ
>WENV183468395
OMEG01011153
[OMEG] human gut metagenome; feces
46
122
+
Arg
ACG
[ENA]
¢þ
>WENV183468371
OMEG01004960
[OMEG] human gut metagenome; feces
54
130
+
Met
CAT
[ENA]
¢þ
>WENV183468401
OMEG01012055
[OMEG] human gut metagenome; feces
66
151
+
Leu
CAA
[ENA]
¢þ
>WENV183468402
OMEG01012978
[OMEG] human gut metagenome; feces
83
165
+
Leu
CAG
[ENA]
¢þ
>WENV183468396
OMEG01011652
[OMEG] human gut metagenome; feces
92
181
+
Ser
GCT
[ENA]
¢þ
>WENV183468367
OMEG01003766
[OMEG] human gut metagenome; feces
98
25
-
Gln
CTG
[ENA]
¢þ
>WENV183468383
OMEG01005657
[OMEG] human gut metagenome; feces
122
47
-
Lys
CTT
[ENA]
¢þ
>WENV183468378
OMEG01005091
[OMEG] human gut metagenome; feces
128
44
-
Leu
GAG
[ENA]
¢þ
>WENV183468368
OMEG01003810
[OMEG] human gut metagenome; feces
141
227
+
Leu
CAG
[ENA]
¢þ
>WENV183468381
OMEG01005419
[OMEG] human gut metagenome; feces
155
79
-
His
GTG
[ENA]
¢þ
>WENV183468342
OMEG01000939
[OMEG] human gut metagenome; feces
180
87
-
Ser
GCT
[ENA]
¢þ
>WENV183468349
OMEG01002222
[OMEG] human gut metagenome; feces
181
253
+
Thr
GGT
[ENA]
¢þ
>WENV183468403
OMEG01012978
[OMEG] human gut metagenome; feces
189
273
+
Leu
GAG
[ENA]
¢þ
>WENV183468339
OMEG01000696
[OMEG] human gut metagenome; feces
198
273
+
Ile2
CAT
[ENA]
¢þ
>WENV183468382
OMEG01005657
[OMEG] human gut metagenome; feces
200
126
-
Glu
CTC
[ENA]
¢þ
>WENV183468364
OMEG01003441
[OMEG] human gut metagenome; feces
206
120
-
Leu
CAA
[ENA]
¢þ
>WENV183468397
OMEG01011652
[OMEG] human gut metagenome; feces
211
283
+
Asn
GTT
[ENA]
¢þ
>WENV183468377
OMEG01005091
[OMEG] human gut metagenome; feces
213
138
-
Lys
TTT
[ENA]
¢þ
>WENV183468372
OMEG01004960
[OMEG] human gut metagenome; feces
222
293
+
Glu
TTC
[ENA]
¢þ
>WENV183468345
OMEG01001893
[OMEG] human gut metagenome; feces
222
296
+
Thr
TGT
[ENA]
¢þ
>WENV183468340
OMEG01000876
[OMEG] human gut metagenome; feces
232
303
+
Sup
CTA
[ENA]
¢þ
>WENV183468380
OMEG01005419
[OMEG] human gut metagenome; feces
238
162
-
Arg
TCT
[ENA]
¢þ
>WENV183468408
OMEG01015211
[OMEG] human gut metagenome; feces
239
155
-
Tyr
GTA
[ENA]
¢þ
>WENV183468391
OMEG01009151
[OMEG] human gut metagenome; feces
282
367
+
Leu
CAG
[ENA]
¢þ
>WENV183468350
OMEG01002222
[OMEG] human gut metagenome; feces
285
358
+
Gly
CCC
[ENA]
¢þ
>WENV183468404
OMEG01012978
[OMEG] human gut metagenome; feces
287
362
+
Gly
GCC
[ENA]
¢þ
>WENV183468398
OMEG01011652
[OMEG] human gut metagenome; feces
298
371
+
Glu
TTC
[ENA]
¢þ
>WENV183468341
OMEG01000939
[OMEG] human gut metagenome; feces
300
213
-
Ser
TGA
[ENA]
¢þ
>WENV183468363
OMEG01003269
[OMEG] human gut metagenome; feces
341
267
-
Cys
GCA
[ENA]
¢þ
>WENV183468393
OMEG01009956
[OMEG] human gut metagenome; feces
363
434
+
Gly
GCC
[ENA]
¢þ
>WENV183468355
OMEG01002794
[OMEG] human gut metagenome; feces
363
438
+
Val
GAC
[ENA]
¢þ
>WENV183468405
OMEG01012978
[OMEG] human gut metagenome; feces
366
439
+
Cys
GCA
[ENA]
¢þ
>WENV183468392
OMEG01009242
[OMEG] human gut metagenome; feces
380
456
+
Arg
CCG
[ENA]
¢þ
>WENV183468399
OMEG01011652
[OMEG] human gut metagenome; feces
392
465
+
Thr
TGT
[ENA]
¢þ
>WENV183468376
OMEG01005091
[OMEG] human gut metagenome; feces
398
324
-
His
GTG
[ENA]
¢þ
>WENV183468407
OMEG01014257
[OMEG] human gut metagenome; feces
410
336
-
Cys
GCA
[ENA]
¢þ
>WENV183468406
OMEG01012978
[OMEG] human gut metagenome; feces
445
531
+
Leu
TAA
[ENA]
¢þ
>WENV183468362
OMEG01003269
[OMEG] human gut metagenome; feces
446
371
-
Gly
GCC
[ENA]
¢þ
>WENV183468394
OMEG01011011
[OMEG] human gut metagenome; feces
453
528
+
Ala
GGC
[ENA]
¢þ
>WENV183468379
OMEG01005102
[OMEG] human gut metagenome; feces
464
555
+
Ser
GGA
[ENA]
¢þ
>WENV183468352
OMEG01002493
[OMEG] human gut metagenome; feces
466
390
-
Ile
GAT
[ENA]
¢þ
>WENV183468400
OMEG01011652
[OMEG] human gut metagenome; feces
470
546
+
Ile2
CAT
[ENA]
¢þ
>WENV183468375
OMEG01005091
[OMEG] human gut metagenome; feces
510
435
-
Arg
TCT
[ENA]
¢þ
>WENV183468390
OMEG01007957
[OMEG] human gut metagenome; feces
515
440
-
Glu
TTC
[ENA]
¢þ
>WENV183468385
OMEG01007090
[OMEG] human gut metagenome; feces
529
603
+
Gly
TCC
[ENA]
¢þ
>WENV183468388
OMEG01007516
[OMEG] human gut metagenome; feces
543
617
+
Asn
GTT
[ENA]
¢þ
>WENV183468351
OMEG01002493
[OMEG] human gut metagenome; feces
552
477
-
Ala
TGC
[ENA]
¢þ
>WENV183468389
OMEG01007799
[OMEG] human gut metagenome; feces
558
634
+
Pro
CGG
[ENA]
¢þ
>WENV183468386
OMEG01007090
[OMEG] human gut metagenome; feces
607
683
+
Arg
TCT
[ENA]
¢þ
>WENV183468361
OMEG01003269
[OMEG] human gut metagenome; feces
609
533
-
Asp
GTC
[ENA]
¢þ
>WENV183468374
OMEG01005091
[OMEG] human gut metagenome; feces
614
544
-
Gly
TCC
[ENA]
¢þ
>WENV183468347
OMEG01002055
[OMEG] human gut metagenome; feces
635
560
-
Trp
CCA
[ENA]
¢þ
>WENV183468387
OMEG01007388
[OMEG] human gut metagenome; feces
636
712
+
Val
CAC
[ENA]
¢þ
>WENV183468370
OMEG01004150
[OMEG] human gut metagenome; feces
694
619
-
Pro
CGG
[ENA]
¢þ
>WENV183468373
OMEG01005091
[OMEG] human gut metagenome; feces
696
621
-
Pro
TGG
[ENA]
¢þ
>WENV183468365
OMEG01003566
[OMEG] human gut metagenome; feces
699
774
+
Ala
GGC
[ENA]
¢þ
>WENV183468357
OMEG01003145
[OMEG] human gut metagenome; feces
758
833
+
fMet
CAT
[ENA]
¢þ
>WENV183468346
OMEG01002037
[OMEG] human gut metagenome; feces
773
848
+
Gly
GCC
[ENA]
¢þ
>WENV183468369
OMEG01004150
[OMEG] human gut metagenome; feces
796
723
-
Gln
CTG
[ENA]
¢þ
>WENV183468358
OMEG01003145
[OMEG] human gut metagenome; feces
839
912
+
Phe
GAA
[ENA]
¢þ
>WENV183468360
OMEG01003269
[OMEG] human gut metagenome; feces
874
799
-
Ala
TGC
[ENA]
¢þ
>WENV183468366
OMEG01003647
[OMEG] human gut metagenome; feces
879
804
-
Pro
CGG
[ENA]
¢þ
>WENV183468354
OMEG01002691
[OMEG] human gut metagenome; feces
889
813
-
Ile2
CAT
[ENA]
¢þ
>WENV183468356
OMEG01003143
[OMEG] human gut metagenome; feces
950
1025
+
Ala
TGC
[ENA]
¢þ
>WENV183468359
OMEG01003269
[OMEG] human gut metagenome; feces
958
885
-
Arg
TCT
[ENA]
¢þ
>WENV183468353
OMEG01002691
[OMEG] human gut metagenome; feces
978
902
-
Pro
TGG
[ENA]
¢þ
>WENV183468338
OMEG01000582
[OMEG] human gut metagenome; feces
1307
1397
+
Ser
CGA
[ENA]
¢þ
>WENV183468343
OMEG01001062
[OMEG] human gut metagenome; feces
1372
1448
+
Arg
TCT
[ENA]
¢þ
>WENV183468344
OMEG01001062
[OMEG] human gut metagenome; feces
1455
1531
+
His
GTG
[ENA]
¢þ
>WENV183468337
OMEG01000455
[OMEG] human gut metagenome; feces
1474
1549
+
Val
GAC
[ENA]
¢þ
>WENV183468335
OMEG01000202
[OMEG] human gut metagenome; feces
2233
2308
+
Ala
TGC
[ENA]
¢þ
>WENV183468336
OMEG01000202
[OMEG] human gut metagenome; feces
2333
2409
+
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK