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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OMEU] human gut metagenome; feces
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183474506
OMEU01001009
[OMEU] human gut metagenome; feces
61
135
+
Asn
GTT
[ENA]
¢þ
>WENV183474501
OMEU01000547
[OMEU] human gut metagenome; feces
119
45
-
Pro
TGG
[ENA]
¢þ
>WENV183474500
OMEU01000501
[OMEU] human gut metagenome; feces
132
59
-
Ala
TGC
[ENA]
¢þ
>WENV183474499
OMEU01000309
[OMEU] human gut metagenome; feces
162
86
-
fMet
CAT
[ENA]
¢þ
>WENV183474504
OMEU01000712
[OMEU] human gut metagenome; feces
189
271
+
Tyr
GTA
[ENA]
¢þ
>WENV183474502
OMEU01000618
[OMEU] human gut metagenome; feces
207
282
+
His
GTG
[ENA]
¢þ
>WENV183474498
OMEU01000309
[OMEU] human gut metagenome; feces
255
183
-
Thr
TGT
[ENA]
¢þ
>WENV183474497
OMEU01000309
[OMEU] human gut metagenome; feces
340
266
-
Val
TAC
[ENA]
¢þ
>WENV183474503
OMEU01000653
[OMEU] human gut metagenome; feces
341
269
-
Glu
TTC
[ENA]
¢þ
>WENV183474505
OMEU01000712
[OMEU] human gut metagenome; feces
385
457
+
Thr
GGT
[ENA]
¢þ
>WENV183474496
OMEU01000309
[OMEU] human gut metagenome; feces
444
369
-
Asp
GTC
[ENA]
¢þ
>WENV183474495
OMEU01000065
[OMEU] human gut metagenome; feces
879
952
+
Trp
CCA
[ENA]
¢þ
>WENV183474494
OMEU01000003
[OMEU] human gut metagenome; feces
1448
1374
-
Ala
TGC
[ENA]
¢þ
>WENV183474493
OMEU01000003
[OMEU] human gut metagenome; feces
1560
1486
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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